RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FAM111BQ6SJ93 734 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 LARP4Q71RC2 724 aaKnown RBP eCLIP11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ADGRE4PQ86SQ3 457 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GTF2IRD2Q86UP8 949 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CXorf67Q86X51 503 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 UBQLNLQ8IYU4 475 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 METTL4Q8N3J2 472 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SELENOMQ8WWX9 145 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CAVIN3Q969G5 261 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TRMT61AQ96FX7 289 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ADOQ96SZ5 270 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 VPS11Q9H270 941 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PAQR5Q9NXK6 330 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PPP4R1LQ9P1A2 415 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PLLPQ9Y342 182 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 EMC9Q9Y3B6 208 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 WIF1Q9Y5W5 379 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 DNAJC13O75165 2243 aa11.12□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CCDC151A5D8V7 595 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 EMC8O43402 210 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 UGT2B11O75310 529 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 OTCP00480 354 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 MTHFD2P13995 350 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 UGT2B10P36537 528 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SERPINB8P50452 374 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 LHX2P50458 406 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GFRA1P56159 465 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CTBP2P56545 445 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GANABQ14697 944 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 HEPACAMQ14CZ8 416 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 EXOSC7Q15024 291 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TSNAXIP1Q2TAA8 658 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 BEX5Q5H9J7 111 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 RAET1LQ5VY80 246 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 STK32CQ86UX6 486 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 WDSUB1Q8N9V3 476 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TMBIM1Q969X1 311 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PHF21BQ96EK2 531 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SLC35A4Q96G79 324 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ZC3HAV1LQ96H79 300 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PIGQQ9BRB3 760 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ZNF717Q9BY31 904 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 MRPL1Q9BYD6 325 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SHCBP1LQ9BZQ2 653 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 KLHL4Q9C0H6 718 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 BRF2Q9HAW0 419 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 C3orf14Q9HBI5 128 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 MAT2BQ9NZL9 334 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 UTS2RQ9UKP6 389 aa11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB3-203ENST00000425319 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 STX16O14662 325 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 HCRTR2O43614 444 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 COQ9O75208 318 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CNOT4O95628 575 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 KRT6AP02538 564 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 KRT6BP04259 564 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 CD8BP10966 210 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 HK1P19367 917 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 S1PR1P21453 382 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GRK2P25098 689 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GMPRP36959 345 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 KRT6CP48668 564 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GPX6P59796 221 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SIRPAP78324 504 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 DLG1Q12959 904 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ZNHIT3Q15649 155 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GLYR1Q49A26 553 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TRMT12Q53H54 448 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PDSS1Q5T2R2 415 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 OR5M10Q6IEU7 315 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PPP4R4Q6NUP7 873 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 BTLAQ7Z6A9 289 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 PTGR2Q8N8N7 351 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 STARD4Q96DR4 205 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GSX2Q9BZM3 304 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 IQCGQ9H095 443 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 NGBQ9NPG2 151 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 EHD3Q9NZN3 535 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 VPS29Q9UBQ0 182 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ZNF639Q9UID6 485 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 ZNF175Q9Y473 711 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SNX8Q9Y5X2 465 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 NAV3Q8IVL0 2385 aa11.1□□□□□ -0.63
HLA-DQB3-203ENST00000425319 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GNG14A0A1W2PPG7 69 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TNFSF13O75888 250 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 SIX3O95343 332 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 TGM6O95932 706 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 COL6A2P12110 1019 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 HSD3B1P14060 373 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 HSD3B2P26439 372 aa11.09□□□□□ -0.63
HLA-DQB3-203ENST00000425319 GSTM5P46439 218 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms