RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 DCDC2Q9UHG0 476 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 SNX6Q9UNH7 406 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 ASB4Q9Y574 426 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 CLCA3PQ9Y6N3 262 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 V9GYY5 206 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-205ENST00000419378 DOPEY1Q5JWR5 2465 aa6.42□□□□□ -1.38
HMGN1-205ENST00000419378 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 G3V2L1 256 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 FCHO1O14526 889 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 COPEO14579 308 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PROM1O43490 865 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PRKNO60260 465 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SLC25A12O75746 678 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 NEURL1O76050 574 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 RASAL1O95294 804 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 CBX6O95503 412 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 AIFM1O95831 613 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 DDAH2O95865 285 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PDYNP01213 254 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 GBAP04062 536 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 JUNP05412 331 aaKnown RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 NUDT17P0C025 328 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 FAM58BPP0C7Q3 252 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 VSIG10L2P0DP72 767 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 MYL2P10916 166 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 COX7A2P14406 83 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 KRT4P19013 534 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 TNNI3P19429 210 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 IMPDH1P20839 514 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 TLX1P31314 330 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 CRHR1P34998 444 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 BUD31P41223 144 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 STT3AP46977 705 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 CYB561P49447 251 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 TDGF1P3P51864 188 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 ADAM8P78325 824 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PLIN5Q00G26 463 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PMP22Q01453 160 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 DUSP2Q05923 314 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 LCP2Q13094 533 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 NFYCQ13952 458 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 EIF2S3LQ2VIR3 472 aaKnown RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF766Q5HY98 468 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 TCHHL1Q5QJ38 904 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 FHL5Q5TD97 284 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF324BQ6AW86 544 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SPINK14Q6IE38 97 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 EMBQ6PCB8 327 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 HSDL2Q6YN16 418 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 GPRIN3Q6ZVF9 776 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 COMMD6Q7Z4G1 85 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SLC22A9Q8IVM8 553 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 C4orf33Q8N1A6 199 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PQLC1Q8N2U9 271 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 METTL4Q8N3J2 472 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 HORMAD2Q8N7B1 307 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF321PQ8N8H1 164 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SYT8Q8NBV8 401 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 MORN4Q8NDC4 146 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 ST6GALNAC3Q8NDV1 305 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 C7orf57Q8NEG2 295 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 MYRIPQ8NFW9 859 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SLC2A12Q8TD20 617 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SELENOMQ8WWX9 145 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 NR4A3Q92570 626 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 TANKQ92844 425 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 DAZLQ92904 295 aaKnown RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 CAVIN3Q969G5 261 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 CCDC126Q96EE4 140 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 C5orf34Q96MH7 638 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 DGAT2Q96PD7 388 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 MRPL1Q9BYD6 325 aaKnown RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 HES7Q9BYE0 225 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 OR8D2Q9GZM6 311 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 GSTO2Q9H4Y5 243 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 LDAHQ9H6V9 325 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 BRF2Q9HAW0 419 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 BCO1Q9HAY6 547 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 KLHL1Q9NR64 748 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 TEX10Q9NXF1 929 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-205ENST00000419378 LRFN1Q9P244 771 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 SLC12A4Q9UP95 1085 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 STK38LQ9Y2H1 464 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 PCDHGB6Q9Y5F9 930 aa6.41□□□□□ -1.38
HMGN1-205ENST00000419378 ARHGAP10A1A4S6 786 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 GLOD5A6NK44 160 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 TMEM200CA6NKL6 621 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 WASHC1A8K0Z3 465 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 MANBAO00462 879 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 UBFD1O14562 309 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 NME2P1O60361 137 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 PLIN3O60664 434 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ITGA10O75578 1167 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ZFAND5O76080 213 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 AGFG2O95081 481 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CNOT4O95628 575 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ESRRBO95718 433 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms