RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 TEX13CA0A0J9YWL9 993 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 KRT36O76013 467 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 MYF5P13349 255 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 DCKP27707 260 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 NEIL2Q969S2 332 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 ZNF707Q96C28 371 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-202ENST00000418600 ZDHHC2Q9UIJ5 367 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 OR14I1A6ND48 311 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 POM121BA6NF01 834 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 PTDSS1P48651 473 aaKnown RBP16■□□□□ 0.15
SYNGAP1-202ENST00000418600 NKPD1Q17RQ9 610 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 MSS51Q4VC12 460 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 COMMD6Q7Z4G1 85 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 ZNF619Q8N2I2 560 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 TNFAIP8L1Q8WVP5 186 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 CLPTM1LQ96KA5 538 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 K7ESM1 405 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 FECHP22830 423 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 PPIAP62937 165 aaKnown RBP16■□□□□ 0.15
SYNGAP1-202ENST00000418600 KMT5CQ86Y97 462 aa16■□□□□ 0.15
SYNGAP1-202ENST00000418600 S100A6P06703 90 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 CRYZQ08257 329 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 DNASE1L3Q13609 305 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 C15orf40Q8WUR7 153 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 FKBP10Q96AY3 582 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 LOXL4Q96JB6 756 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 DPH2Q9BQC3 489 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 ACTR6Q9GZN1 396 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 CLEC4EQ9ULY5 219 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 AKAP11Q9UKA4 1901 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 STK17BO94768 372 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 PSPHP78330 225 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 TAP2Q03519 686 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 OR4D1Q15615 310 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 RANBP10Q6VN20 620 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 CUEDC1Q9NWM3 386 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 PARPBPQ9NWS1 579 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 NOSIPQ9Y314 301 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 ITGA10O75578 1167 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 OR3A3P47888 321 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 OR3A2P47893 321 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 DAP3P51398 398 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 KLHL36Q8N4N3 616 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 SARAFQ96BY9 339 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 ADOQ96SZ5 270 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 MTMR10Q9NXD2 777 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 GGT5P36269 586 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 SLCO6A1Q86UG4 719 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 PQLC1Q8N2U9 271 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 NANSQ9NR45 359 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 GNG8Q9UK08 70 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 ZNF223Q9UK11 482 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 CBFA2T3O75081 653 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 ANXA8P13928 327 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 CCR7P32248 378 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 FOXN2P32314 431 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 PRDX1Q06830 199 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 PERM1Q5SV97 790 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 GLIS1Q8NBF1 620 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 DIRAS2Q96HU8 199 aa15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 ZNF71Q9NQZ8 489 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-202ENST00000418600 GALR3O60755 368 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 RASAL1O95294 804 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 E2F2Q14209 437 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 KIAA1958Q8N8K9 716 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 CD200R1Q8TD46 325 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 OSTF1Q92882 214 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 UFD1Q92890 307 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 LRRC58Q96CX6 371 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 MTHFD2LQ9H903 347 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 CCDC59Q9P031 241 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 KDM4BO94953 1096 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 HOXB9P17482 250 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 AOAHP28039 575 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 MSX2P35548 267 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 RSPO4Q2I0M5 234 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 CDKL4Q5MAI5 379 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 HMGN2P46Q86SG4 172 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 BORCS5Q969J3 196 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 SPTSSAQ969W0 71 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 NSUN5Q96P11 429 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 FSCN3Q9NQT6 498 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 ZNF639Q9UID6 485 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 TBC1D24Q9ULP9 559 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 SLC35A3Q9Y2D2 325 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 HTR1AP08908 422 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 MOGQ16653 247 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 BCL7AQ4VC05 210 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 TECRLQ5HYJ1 363 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 AFMIDQ63HM1 303 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 FRMD1Q8N878 549 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 OPN1LWP04000 364 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 EXOSC7Q15024 291 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 SWT1Q5T5J6 900 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 MRPL21Q7Z2W9 205 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 OR11L1Q8NGX0 322 aa15.98■□□□□ 0.15
SYNGAP1-202ENST00000418600 TRIB1Q96RU8 372 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms