RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SLC18A2Q05940 514 aa23.1■■□□□ 1.29
VEGFA-208ENST00000417285 CEBPEQ15744 281 aa23.1■■□□□ 1.29
VEGFA-208ENST00000417285 EIPR1Q53HC9 387 aa23.1■■□□□ 1.29
VEGFA-208ENST00000417285 WIPI1Q5MNZ9 446 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-208ENST00000417285 TRIM46Q7Z4K8 759 aa23.1■■□□□ 1.29
VEGFA-208ENST00000417285 FAM83FQ8NEG4 500 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-208ENST00000417285 TNIP2Q8NFZ5 429 aa23.1■■□□□ 1.29
VEGFA-208ENST00000417285 WDYHV1Q96HA8 205 aa23.1■■□□□ 1.29
VEGFA-208ENST00000417285 STMN4Q9H169 189 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-208ENST00000417285 C12orf65Q9H3J6 166 aaKnown RBP23.1■■□□□ 1.29
VEGFA-208ENST00000417285 RRAGDQ9NQL2 400 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-208ENST00000417285 FOXD3Q9UJU5 478 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-208ENST00000417285 TLDC2A0PJX2 215 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 PRAMEF25A6NGN4 478 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 CPN1P15169 458 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 DDCP20711 480 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 KRT20P35900 424 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 PTGDSP41222 190 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 EFR3AQ14156 821 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 TESK1Q15569 626 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 SPNS3Q6ZMD2 512 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 TMEM200AQ86VY9 491 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 OR9A2Q8NGT5 310 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 CDC26Q8NHZ8 85 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 FAM76AQ8TAV0 307 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 ZPLD1Q8TCW7 415 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 KAT2AQ92830 837 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 TMBIM1Q969X1 311 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 SLC35A4Q96G79 324 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 BBS4Q96RK4 519 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 IQCGQ9H095 443 aaKnown RBP23.09■■□□□ 1.29
VEGFA-208ENST00000417285 TAS2R9Q9NYW1 312 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 SENP1Q9P0U3 644 aa23.09■■□□□ 1.29
VEGFA-208ENST00000417285 RSL1D1O76021 490 aaKnown RBP23.08■■□□□ 1.29
VEGFA-208ENST00000417285 CT45A8P0DMV1 189 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 CT45A9P0DMV2 189 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 BMP5P22003 454 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 KIR2DL3P43628 341 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 ASCL1P50553 236 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 MRPS22P82650 360 aaKnown RBP23.08■■□□□ 1.29
VEGFA-208ENST00000417285 C2orf80Q0P641 193 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 RCAN2Q14206 197 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 FBXL19-AS1Q494R0 122 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 CT45A2Q5DJT8 189 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 DESI1Q6ICB0 168 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 YRDCQ86U90 279 aaKnown RBP23.08■■□□□ 1.29
VEGFA-208ENST00000417285 FAM9CQ8IZT9 166 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 RIBC1Q8N443 379 aaPredicted RBP23.08■■□□□ 1.29
VEGFA-208ENST00000417285 WDSUB1Q8N9V3 476 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 VSTM2LQ96N03 204 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 GALNT9Q9HCQ5 603 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 TAS2R7Q9NYW3 318 aa23.08■■□□□ 1.29
VEGFA-208ENST00000417285 FREM3P0C091 2139 aa23.08■■□□□ 1.28
VEGFA-208ENST00000417285 NCKAP5O14513 1909 aa23.08■■□□□ 1.28
VEGFA-208ENST00000417285 AKAP9Q99996 3911 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 C2orf72A6NCS6 295 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 ERN1O75460 977 aaKnown RBP23.07■■□□□ 1.28
VEGFA-208ENST00000417285 SLITRK5O94991 958 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 UQCRC1P31930 480 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 PNLIPRP2P54317 469 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 ENPP6Q6UWR7 440 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 PLCZ1Q86YW0 608 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 NAXEQ8NCW5 288 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 RNASE6Q93091 150 aaKnown RBP23.07■■□□□ 1.28
VEGFA-208ENST00000417285 TRIB1Q96RU8 372 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 ADOQ96SZ5 270 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 SERHLQ9NQF3 203 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 MIEF1Q9NQG6 463 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 MKS1Q9NXB0 559 aa23.07■■□□□ 1.28
VEGFA-208ENST00000417285 MRPS18CQ9Y3D5 142 aaKnown RBP23.07■■□□□ 1.28
VEGFA-208ENST00000417285 POLR3HQ9Y535 204 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-208ENST00000417285 MBD3L4A6NDZ8 208 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-208ENST00000417285 MBD3L3A6NE82 208 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-208ENST00000417285 MBD3L5A6NJ08 208 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-208ENST00000417285 MYO1GB0I1T2 1018 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 NUDT17P0C025 328 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 OPRM1P35372 400 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 FAM71E1Q6IPT2 247 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 POMZP3Q6PJE2 187 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 LARP4Q71RC2 724 aaKnown RBP eCLIP23.06■■□□□ 1.281e-25■□□□□ 10.3
VEGFA-208ENST00000417285 C10orf107Q8IVU9 208 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 OR2W6PQ8NHA6 318 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 OR14L1PQ8NHC6 308 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 MBD3L2Q8NHZ7 208 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-208ENST00000417285 APOPT1Q96IL0 206 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 METTL2AQ96IZ6 378 aaKnown RBP23.06■■□□□ 1.28
VEGFA-208ENST00000417285 TRMOQ9BU70 441 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 OR2B2Q9GZK3 357 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 ANKRA2Q9H9E1 313 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 FOLH1BQ9HBA9 442 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 TNFRSF12AQ9NP84 129 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 MYNNQ9NPC7 610 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 MAPRE3Q9UPY8 281 aa23.06■■□□□ 1.28
VEGFA-208ENST00000417285 SLC28A1O00337 649 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 TSPAN2O60636 221 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 TRIM13O60858 407 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 IL18BPO95998 194 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 CYP4B1P13584 511 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 CTSSP25774 331 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 IL12BP29460 328 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms