RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 SAR1AQ9NR31 198 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZIM2Q9NZV7 527 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 PSME2Q9UL46 239 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 NAALAD2Q9Y3Q0 740 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 POLR3HQ9Y535 204 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 GPR45Q9Y5Y3 372 aa12.48□□□□□ -0.41
RAPGEF1-204ENST00000414781 A0A0A6YYD5 115 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 TRIM64A6NGJ6 449 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 TRIM64BA6NI03 449 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 PSMD12O00232 456 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 RTCAO00442 366 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 FCHO1O14526 889 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 EEDO75530 441 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 SLC22A3O75751 556 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 ALDOCP09972 364 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 ADH7P40394 386 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 BUD31P41223 144 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 DIO3P55073 304 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 RAE1P78406 368 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 MAPRE2Q15555 327 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 MFSD4BQ5TF39 518 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 FAM219BQ5XKK7 198 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 PAPD4Q6PIY7 484 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZNF227Q86WZ6 799 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 NATD1Q8N6N6 113 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 OR5M9Q8NGP3 310 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 C16orf78Q8WTQ4 265 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 MTERF3Q96E29 417 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 YIPF4Q9BSR8 244 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZNF717Q9BY31 904 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 MYNNQ9NPC7 610 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 GIMAP2Q9UG22 337 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 DLGAP4Q9Y2H0 992 aa12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 CHD3Q12873 2000 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-204ENST00000414781 A0A0A6YYC8 382 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 HSPB2A8KAH6 182 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 I3L1I5 382 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 ACOT7O00154 380 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 DVL2O14641 736 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 FOXS1O43638 330 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 IL1RNP18510 177 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 SDC1P18827 310 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 JAK1P23458 1154 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 HPCAL1P37235 193 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 C21orf58P58505 322 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 ACTN3Q08043 901 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 C2orf80Q0P641 193 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 HSPB2Q16082 182 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 SYT16Q17RD7 645 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 DPY19L1Q2PZI1 675 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 C1orf185Q5T7R7 199 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 RTL6Q6ICC9 239 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 MRM1Q6IN84 353 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 VWA5B2Q8N398 1253 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 OR9A4Q8NGU2 314 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 TSPEARQ8WU66 669 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 TSSK3Q96PN8 268 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 SORBS1Q9BX66 1292 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 NMUR2Q9GZQ4 415 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 AICDAQ9GZX7 198 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 MIEF1Q9NQG6 463 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 ATAD3AQ9NVI7 634 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 EHD3Q9NZN3 535 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 DAPP1Q9UN19 280 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 MRPS33Q9Y291 106 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.41
RAPGEF1-204ENST00000414781 ARID1AO14497 2285 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 ANK3Q12955 4377 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 DNAJC13O75165 2243 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 A0A0G2JN53 185 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 C1orf226A1L170 272 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 SGK494L7N484 410 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 CLDN4O14493 209 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 GBAP04062 536 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 HRGP04196 525 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 IL6P05231 212 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 RNH1P13489 461 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 CPN2P22792 545 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 CERS1P27544 350 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 MLF1P58340 268 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 MAT1AQ00266 395 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 SORDQ00796 357 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 DMTNQ08495 405 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 SFT2D3Q587I9 215 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 ZNF793Q6ZN11 406 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 CLNKQ7Z7G1 428 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 SAMD14Q8IZD0 417 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 CDC26Q8NHZ8 85 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 CMTM5Q96DZ9 223 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 DEFB127Q9H1M4 99 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 MYLK2Q9H1R3 596 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 REEP4Q9H6H4 257 aa12.45□□□□□ -0.42
RAPGEF1-204ENST00000414781 ZDHHC11Q9H8X9 412 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms