RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TUBA3E	Q6PEY2	450 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	NPSR1	Q6W5P4	371 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.15	□□□□□ -0.46
SF1-206	ENST00000413725	SLC34A3	Q8N130	599 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	CYP4Z2P	Q8N1L4	340 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	CLEC4F	Q8N1N0	589 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	RP9	Q8TA86	221 aa	Known RBP	12.15	□□□□□ -0.46
SF1-206	ENST00000413725	GPR151	Q8TDV0	419 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	ADAMTS15	Q8TE58	950 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	HOXB13	Q92826	284 aa	Predicted RBP	12.15	□□□□□ -0.46
SF1-206	ENST00000413725	SPACA9	Q96E40	222 aa	Predicted RBP	12.15	□□□□□ -0.46
SF1-206	ENST00000413725	NEURL3	Q96EH8	262 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	LRRC37B	Q96QE4	947 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	PHF12	Q96QT6	1004 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	STAC	Q99469	402 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	YIPF4	Q9BSR8	244 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	CCDC106	Q9BWC9	280 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.15	□□□□□ -0.46
SF1-206	ENST00000413725	MYLK2	Q9H1R3	596 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	GPATCH2	Q9NW75	528 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	PLA2G3	Q9NZ20	509 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	LRFN1	Q9P244	771 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	MRTO4	Q9UKD2	239 aa	Known RBP	12.15	□□□□□ -0.46
SF1-206	ENST00000413725	PCDHGB3	Q9Y5G1	929 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	NPFFR2	Q9Y5X5	522 aa		12.15	□□□□□ -0.46
SF1-206	ENST00000413725	IGSF10	Q6WRI0	2623 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	DUXA	A6NLW8	204 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725		K7EM74	188 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	ATXN7	O15265	892 aa	Predicted RBP	12.14	□□□□□ -0.47
SF1-206	ENST00000413725	OR6B1	O95007	311 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	NKX2-2	O95096	273 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	AGR2	O95994	175 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	F10	P00742	488 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	FBXO45	P0C2W1	286 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	ACP2	P11117	423 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	CD1E	P15812	388 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	NAGA	P17050	411 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PPIB	P23284	216 aa	Known RBP	12.14	□□□□□ -0.47
SF1-206	ENST00000413725	CD96	P40200	585 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	MAGEA8	P43361	318 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	KHK	P50053	298 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	TXNL4A	P83876	142 aa	Known RBP	12.14	□□□□□ -0.47
SF1-206	ENST00000413725	NFYC	Q13952	458 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	LY6D	Q14210	128 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	OR1C1	Q15619	314 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	CYP27C1	Q4G0S4	372 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PAGE3	Q5JUK9	113 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	LRIF1	Q5T3J3	769 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	IL20RB	Q6UXL0	311 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	RTL4	Q6ZR62	310 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	DHDDS	Q86SQ9	333 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PRR22	Q8IZ63	422 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	DPP10	Q8N608	796 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	COX18	Q8N8Q8	333 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PCYOX1L	Q8NBM8	494 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	LSM14A	Q8ND56	463 aa	Known RBP	12.14	□□□□□ -0.47
SF1-206	ENST00000413725	FBXO30	Q8TB52	745 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	ZFP90	Q8TF47	636 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	TMEM125	Q96AQ2	219 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	CMTM5	Q96DZ9	223 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	OMA1	Q96E52	524 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	C16orf58	Q96GQ5	468 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	SGCZ	Q96LD1	299 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	C5orf34	Q96MH7	638 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PAIP1	Q9H074	479 aa	Known RBP	12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PIGU	Q9H490	435 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	RAD21L1	Q9H4I0	556 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.14	□□□□□ -0.47
SF1-206	ENST00000413725	DUSP22	Q9NRW4	184 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	GIN1	Q9NXP7	522 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	ANKRD10	Q9NXR5	420 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	CBLC	Q9ULV8	474 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PCDHB14	Q9Y5E9	798 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	PCNX3	Q9H6A9	2034 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	DNAJC13	O75165	2243 aa		12.14	□□□□□ -0.47
SF1-206	ENST00000413725	TRAV17	A0A0B4J275	112 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	LOC100653049	A0A140TA62	436 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	TP53I11	O14683	189 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	MRAS	O14807	208 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	ZNF354A	O60765	605 aa	Predicted RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	REM1	O75628	298 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	PPM1B	O75688	479 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	KRT34	O76011	436 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	COX4I1	P13073	169 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	CD46	P15529	392 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	PTPN6	P29350	595 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	IL12B	P29460	328 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	PRDX6	P30041	224 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	MAP3K8	P41279	467 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	ST13	P50502	369 aa	Known RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	TNFSF10	P50591	281 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	PSMD4	P55036	377 aa	Known RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	RPS26	P62854	115 aa	Known RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	RPP38	P78345	283 aa	Known RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	MRPS22	P82650	360 aa	Known RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	NTRK2	Q16620	822 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	DUSP5	Q16690	384 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	DECR1	Q16698	335 aa		12.13	□□□□□ -0.47
SF1-206	ENST00000413725	ZNF791	Q3KP31	576 aa	Predicted RBP	12.13	□□□□□ -0.47
SF1-206	ENST00000413725	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms