RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DYRK3O43781 588 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ALOX12BO75342 701 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 STK17BO94768 372 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 NKX2-2O95096 273 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 MFN2O95140 757 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZIC2O95409 532 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 DDAH2O95865 285 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 AK1P00568 194 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 IFNA14P01570 189 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 IGKV3-11P04433 115 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 KLK3P07288 261 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 HNRNPCL4P0DMR1 293 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 TNNI3P19429 210 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 CD247P20963 164 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 CSRP1P21291 193 aaKnown RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 FASP25445 335 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SLC5A2P31639 672 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 GCKP35557 465 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 VHLP40337 213 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SLC37A1P57057 533 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SELENOWP63302 87 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 KCNJ10P78508 379 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 PSG6Q00889 435 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 NCF4Q15080 339 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZNHIT3Q15649 155 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 ARHGAP11BQ3KRB8 267 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 GPAT3Q53EU6 434 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 C3orf38Q5JPI3 329 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 DCST2Q5T1A1 773 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 OGFRL1Q5TC84 451 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 MLIPQ5VWP3 458 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 LPCAT4Q643R3 524 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 FAAH2Q6GMR7 532 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 NPSR1Q6W5P4 371 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 FRRS1Q6ZNA5 592 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 OLIG3Q7RTU3 272 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ANKRD37Q7Z713 158 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 KRT73Q86Y46 540 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ARMC8Q8IUR7 673 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZDHHC21Q8IVQ6 265 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZNF321PQ8N8H1 164 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 COX18Q8N8Q8 333 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SMYD1Q8NB12 490 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 GALNT6Q8NCL4 622 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 CHDHQ8NE62 594 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 C16orf52Q8NHV5 167 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 WDR36Q8NI36 951 aaKnown RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZNF721Q8TF20 911 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 GEMIN6Q8WXD5 167 aaKnown RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 LZICQ8WZA0 190 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 PIK3R3Q92569 461 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 DAZLQ92904 295 aaKnown RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 MR1Q95460 341 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 TPD52L3Q96J77 140 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ART5Q96L15 291 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 COL21A1Q96P44 957 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 BTBD9Q96Q07 612 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 TAAR9Q96RI9 348 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZNF607Q96SK3 696 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 DOHHQ9BU89 302 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 CRB3Q9BUF7 120 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ITPAQ9BY32 194 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZNF350Q9GZX5 532 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 OR10A5Q9H207 317 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SEMA6AQ9H2E6 1030 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SLC38A1Q9H2H9 487 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 YY1AP1Q9H869 796 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 AKIRIN1Q9H9L7 192 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 CALML5Q9NZT1 146 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 FOXJ2Q9P0K8 574 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 PRODH2Q9UF12 536 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 GPN3Q9UHW5 284 aaPredicted RBP6.18□□□□□ -1.42
VPS41-204ENST00000413141 C3orf18Q9UK00 162 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 PCDHGB3Q9Y5G1 929 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 PCDHGA3Q9Y5H0 932 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 CLCA3PQ9Y6N3 262 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 SCN2AQ99250 2005 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 ZNF292O60281 2723 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 GXYLT2A0PJZ3 443 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SAGE2PA6NJ88 616 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 TTC36A6NLP5 189 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 hCG_2039718K7EN88 272 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 CLOCKO15516 846 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 KIAA0513O60268 411 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 BRINP1O60477 761 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 FCMRO60667 390 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 DEAF1O75398 565 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 SERPINB7O75635 380 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 PRSS23O95084 383 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 LDLRP01130 860 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 CAPNS1P04632 268 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 FABP3P05413 133 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 PABPC4LP0CB38 370 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 ETS2P15036 469 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 TNFRSF1BP20333 461 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 RPS4Y1P22090 263 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 GABRA3P34903 492 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 TRHRP34981 398 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 KCNJ5P48544 419 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 EMP2P54851 167 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms