RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 SUSD4Q5VX71 490 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 PLPP4Q5VZY2 271 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 KCTD11Q693B1 232 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 PPP1R27Q86WC6 154 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 ERICH1Q86X53 443 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 CCDC146Q8IYE0 955 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 BATF2Q8N1L9 274 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 RFFLQ8WZ73 363 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 PYCR2Q96C36 320 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 SPACA9Q96E40 222 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 CCDC34Q96HJ3 373 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 ZNF514Q96K75 400 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 PSMD1Q99460 953 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 ISCA1Q9BUE6 129 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 TEKT3Q9BXF9 490 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 TRIM7Q9C029 511 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 RNF41Q9H4P4 317 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 DNAJC4Q9NNZ3 241 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 SLC2A6Q9UGQ3 507 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 CPSF3Q9UKF6 684 aaKnown RBP-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 SMC3Q9UQE7 1217 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 LIPGQ9Y5X9 500 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 CNTRLQ7Z7A1 2325 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 APOBP04114 4563 aaKnown RBP-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 KIAA2026Q5HYC2 2103 aa-1.03□□□□□ -2.57
RNU4-61P-201ENST00000411243 PI4KAP42356 2102 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TSPY2A6NKD2 308 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 IGLV6-57P01721 117 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ALPIP09923 528 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TSPY3P0CV98 308 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TSPY4P0CV99 314 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TSPY8P0CW00 308 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TSPY10P0CW01 314 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TGFBR1P36897 503 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 NOP14P78316 857 aaKnown RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ASPHQ12797 758 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF235Q14590 738 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 XKR7Q5GH72 579 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 MS4A13Q5J8X5 152 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 MARCH8Q5T0T0 291 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZFAND6Q6FIF0 208 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 RAET1GQ6H3X3 334 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ACAD10Q6JQN1 1059 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 NAA16Q6N069 864 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 NANOGP8Q6NSW7 305 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZBTB49Q6ZSB9 765 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 RFPL4BQ6ZWI9 263 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 FAM220AQ7Z4H9 259 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 SCFD2Q8WU76 684 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ESR2Q92731 530 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 NEIL2Q969S2 332 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 TMEM159Q96B96 161 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 RPUSD4Q96CM3 377 aaKnown RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF625Q96I27 306 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF607Q96SK3 696 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 WWP1Q9H0M0 922 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 OPN3Q9H1Y3 402 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 COG4Q9H9E3 785 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 NIT2Q9NQR4 276 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 MED17Q9NVC6 651 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 MYEF2Q9P2K5 600 aaKnown RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 SEC63Q9UGP8 760 aaKnown RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF215Q9UL58 517 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 C22orf24Q9Y442 160 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 POLEQ07864 2286 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 MYO9BQ13459 2157 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 GCN1Q92616 2671 aaKnown RBP-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 CEP295Q9C0D2 2601 aa-1.04□□□□□ -2.58
RNU4-61P-201ENST00000411243 ADGRB3O60242 1522 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 LRRK2Q5S007 2527 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 ALPK3Q96L96 1907 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 SACSQ9NZJ4 4579 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 FREM1Q5H8C1 2179 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 C19orf71A6NCJ1 209 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 ODF3BA8MYP8 253 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 PTGESO14684 152 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 ADAMDEC1O15204 470 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 IGKV5-2P06315 115 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 CD2P06729 351 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 HOXA9P31269 272 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 HNRNPH3P31942 346 aaKnown RBP-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 FHITP49789 147 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 IL15RAQ13261 267 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 DPYSQ14117 519 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 DPYSL3Q14195 570 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 BECN1Q14457 450 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 NTRK2Q16620 822 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF181Q2M3W8 571 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 PDPK2PQ6A1A2 396 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 FUT10Q6P4F1 479 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF730Q6ZMV8 503 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 PAQR9Q6ZVX9 377 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 NT5DC3Q86UY8 548 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 PARGQ86W56 976 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 OSR2Q8N2R0 312 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 CHCHD4Q8N4Q1 142 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 Q8N6K4 173 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 ZNF645Q8N7E2 425 aa-1.05□□□□□ -2.58
RNU4-61P-201ENST00000411243 PDILTQ8N807 584 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms