RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 POLR2CP19387 275 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ELK4P28324 431 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 AQP1P29972 269 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RANGAP1P46060 587 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RFX3P48380 749 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 UGT2B15P54855 530 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SH3BGRP55822 239 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPS27AP62979 156 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 BTN3A2P78410 334 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TNFAIP6P98066 277 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 FLIIQ13045 1269 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRKG2Q13237 762 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PPP2R5CQ13362 524 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 C1orf61Q13536 156 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARFRP1Q13795 201 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CRMP1Q14194 572 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 GRB7Q14451 532 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 IL13RA2Q14627 380 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 POLD3Q15054 466 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ALG11Q2TAA5 492 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRRC75BQ2VPJ9 315 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 DEFB110Q30KQ9 67 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 KLHL12Q53G59 568 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRMT12Q53H54 448 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TTMPQ5BVD1 217 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PAGE2BQ5JRK9 111 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 WDR78Q5VTH9 848 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ELP2Q6IA86 826 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACSM6Q6P461 480 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ALKBH5Q6P6C2 394 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SBSNQ6UWP8 590 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF730Q6ZMV8 503 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 OTOAQ7RTW8 1153 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 C6orf120Q7Z4R8 191 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPAINQ86UA6 219 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RASSF3Q86WH2 238 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPS19BP1Q86WX3 136 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 GKN2Q86XP6 184 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 AADATQ8N5Z0 425 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CELF2-AS1Q8N7Q2 184 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF527Q8NB42 609 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM46DQ8NEK8 389 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SMCR8Q8TEV9 937 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR5P3Q8WZ94 311 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PIGCQ92535 297 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 HDAC2Q92769 488 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 BORCS5Q969J3 196 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLUAP1Q96AJ1 413 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 EXOSC8Q96B26 276 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 GRAMD1AQ96CP6 724 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SDSLQ96GA7 329 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 DHTKD1Q96HY7 919 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPGRIP1Q96KN7 1286 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR5M11Q96RB7 305 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TBCBQ99426 244 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 EYA3Q99504 573 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TSNAXQ99598 290 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 NEURL2Q9BR09 285 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 HDHD3Q9BSH5 251 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 KATNAL1Q9BW62 490 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 HIGD2AQ9BW72 106 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 MRPS26Q9BYN8 205 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 DNAI2Q9GZS0 605 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PORCNQ9H237 461 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 DEPPQ9NTK1 212 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TBC1D23Q9NUY8 699 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CYP39A1Q9NYL5 469 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRO2289Q9P1D8 64 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 USP22Q9UPT9 525 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF148Q9UQR1 794 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 C15orf41Q9Y2V0 281 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 STARD10Q9Y365 291 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 STRAPQ9Y3F4 350 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR2W1Q9Y3N9 320 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 AUP1Q9Y679 476 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM135BQ49AJ0 1406 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SSH2Q76I76 1423 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 NUP205Q92621 2012 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PCF11O94913 1555 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 EIF4G1Q04637 1599 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 MYO15BQ96JP2 1530 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CYP3A7-CYP3A51PA0A087WV96 503 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRAV8-6A0A0B4J262 113 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 GLYATL1P3A0A0U1RQE8 302 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TTC26A0AVF1 554 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 NUPR2A6NF83 97 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 FOXI3A8MTJ6 420 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 A8MVM7 634 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HIDE1A8MVS5 230 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF705EA8MWA4 302 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF99A8MXY4 864 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 AKR1B15C9JRZ8 316 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 F5H423 210 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 H0YJW9 148 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 M0QYG6 137 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAAHO00519 579 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLPP3O14495 311 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ALOX15BO15296 676 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 BCAT2O15382 392 aaPredicted RBP-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms