RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 OR5D13Q8NGL4 314 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 OR13C5Q8NGS8 318 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 WDR36Q8NI36 951 aaKnown RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 FAM76AQ8TAV0 307 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 SMAP2Q8WU79 429 aaPredicted RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 DNAJA4Q8WW22 397 aaPredicted RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 ZNRF4Q8WWF5 429 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 SLC25A36Q96CQ1 311 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 C11orf24Q96F05 449 aaPredicted RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 OMDQ99983 421 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 FUCA2Q9BTY2 467 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 KAT8Q9H7Z6 458 aaKnown RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 ELOVL3Q9HB03 270 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 SGK2Q9HBY8 427 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 UTP6Q9NYH9 597 aaKnown RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 HACD3Q9P035 362 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 ZNF319Q9P2F9 582 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 ONECUT1Q9UBC0 465 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 ZMAT5Q9UDW3 170 aaKnown RBP4.43□□□□□ -1.7
LSM5-206ENST00000409987 SEC14L3Q9UDX4 400 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
LSM5-206ENST00000409987 TMEM94Q12767 1356 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 CARMIL1Q5VZK9 1371 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 A0A1W2PR80 420 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 METTL21EPA6NDL7 271 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 MEI4A8MW99 385 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 HHLA1C9JL84 531 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 ZSCAN12O43309 604 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 OR1F1O43749 312 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 MT-ND2P03891 347 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 PABPC4LP0CB38 370 aaKnown RBP4.42□□□□□ -1.7
LSM5-206ENST00000409987 RALBP11234 206 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 CPN1P15169 458 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 MX1P20591 662 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 SOX3P41225 446 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 SYKP43405 635 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 XGP55808 180 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 HNRNPDQ14103 355 aaKnown RBP4.42□□□□□ -1.7
LSM5-206ENST00000409987 DOC2AQ14183 400 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 CAMK4Q16566 473 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 DUSP5Q16690 384 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 PCK2Q16822 640 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 ACSF3Q4G176 576 aaPredicted RBP4.42□□□□□ -1.7
LSM5-206ENST00000409987 LINC01620Q4KN68 170 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 PLPP4Q5VZY2 271 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 Q6ZSR9 355 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 ECHDC2Q86YB7 292 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 VSTM4Q8IW00 320 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 EFCAB13Q8IY85 973 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 TCEANCQ8N8B7 351 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 SYT14Q8NB59 555 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 DRAXINQ8NBI3 349 aaPredicted RBP4.42□□□□□ -1.7
LSM5-206ENST00000409987 C17orf47Q8NEP4 570 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 OR5AU1Q8NGC0 362 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 TCP11Q8WWU5 503 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 SLC35C1Q96A29 364 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 RAB11FIP5Q9BXF6 653 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 TDRD1Q9BXT4 1180 aaKnown RBP4.42□□□□□ -1.7
LSM5-206ENST00000409987 WWP1Q9H0M0 922 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 SUN2Q9UH99 717 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 SATB2Q9UPW6 733 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 IQSEC2Q5JU85 1478 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 RNF123Q5XPI4 1314 aa4.42□□□□□ -1.7
LSM5-206ENST00000409987 ADAMTSL3P82987 1691 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 PLEKHG2Q9H7P9 1386 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 FHAD1B1AJZ9 1412 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 YEATS2Q9ULM3 1422 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 A0A087WZ39 114 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 HEATR9A2RTY3 570 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 TCP11X1B4DZS4 312 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 H3BTX0 84 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 POLR2DO15514 142 aaKnown RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 HPRP00739 348 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 CFC1BP0CG36 223 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 CFC1P0CG37 223 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 PRKAR1AP10644 381 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 NT5EP21589 574 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 GPX3P22352 226 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 CYLC1P35663 651 aaPredicted RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 MATKP42679 507 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 EIF3EP60228 445 aaKnown RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 HERVK_113P63132 956 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 ERVK-8P63133 956 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 NAAAQ02083 359 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 MAP2K1Q02750 393 aaPredicted RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 IL18Q14116 193 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 GRB14Q14449 540 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 WDR43Q15061 677 aaKnown RBP eCLIP4.41□□□□□ -1.7
LSM5-206ENST00000409987 FGD3Q5JSP0 725 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 TCEAL6Q6IPX3 200 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 BHLHB9Q6PI77 547 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 TRMT11Q7Z4G4 463 aaKnown RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 PAQR7Q86WK9 346 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 C17orf64Q86WR6 236 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 HOGA1Q86XE5 327 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms