RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 BEND4Q6ZU67 534 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ABI3BPQ7Z7G0 1075 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CLNKQ7Z7G1 428 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 LRRC6Q86X45 466 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 IGDCC3Q8IVU1 814 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CDKL3Q8IVW4 592 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 MCEMP1Q8IX19 187 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PHC2Q8IXK0 858 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TIGD4Q8IY51 512 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF567Q8N184 647 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SLC22A18ASQ8N1D0 253 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PELI3Q8N2H9 469 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CCNYL1Q8N7R7 359 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF565Q8N9K5 539 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CATSPER1Q8NEC5 780 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CDC26Q8NHZ8 85 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TEX47Q8TBZ9 253 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CXorf40AQ8TE69 158 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SETD7Q8WTS6 366 aaKnown RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 C1orf54Q8WWF1 131 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 HTR3CQ8WXA8 447 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ROBO4Q8WZ75 1007 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 EXT2Q93063 718 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ECHDC3Q96DC8 303 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PEX11GQ96HA9 241 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 OXNAD1Q96HP4 312 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NSL1Q96IY1 281 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 BBS4Q96RK4 519 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF347Q96SE7 839 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 WDR83Q9BRX9 315 aaKnown RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZSCAN5AQ9BUG6 496 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TRAF4Q9BUZ4 470 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NUSAP1Q9BXS6 441 aaKnown RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SLC17A9Q9BYT1 436 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 C6orf62Q9GZU0 229 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 GSTO2Q9H4Y5 243 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NTN4Q9HB63 628 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 MRM3Q9HC36 420 aaKnown RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 GLOD4Q9HC38 313 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SLC6A13Q9NSD5 602 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 KIAA1456Q9P272 454 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ABI3Q9P2A4 366 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 KLQ9UEF7 1012 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 A4GNTQ9UNA3 340 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PLEKHA6Q9Y2H5 1048 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CMAHPQ9Y471 501 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SNX11Q9Y5W9 270 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 U3KQE9 123 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CEP192Q8TEP8 1941 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ADAMTS9Q9P2N4 1935 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SPEGQ15772 3267 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 DOCK9Q9BZ29 2069 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SPTBN4Q9H254 2564 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ANKRD36A6QL64 1941 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 BPTFQ12830 3046 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 A0A0G2JNJ9 132 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TRBV2A0A0J9YWF9 115 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 A0A0J9YYE9 177 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 C2orf92A0A1B0GVN3 265 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZC3H12DA2A288 527 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 EFCAB10A6NFE3 127 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PRR19A6NJB7 356 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF98A6NK75 572 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CXorf49A8MYA2 514 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 HACD1B0YJ81 288 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FAM25AB3EWG3 89 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FAM25CB3EWG5 89 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FAM25GB3EWG6 89 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PRSS44E7EML9 344 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ATP6V1G2-DDX39BF2Z307 99 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLCO1B7G3V0H7 640 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 K7ESM1 405 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TLR4O00206 839 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CASC3O15234 703 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 PAX4O43316 350 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 HCRTR2O43614 444 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A9O60656 530 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 EDF1O60869 148 aaKnown RBP4.29□□□□□ -1.72
SF3B1-202ENST00000409915 SLC25A12O75746 678 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CLDN7O95471 211 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 TRBC1P01850 177 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 FGGP02679 453 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 IFNA16P05015 189 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 KRT8P05787 483 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 ELFN1P0C7U0 828 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 C8orf89P0DMQ9 161 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CYP4B1P13584 511 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 HPGDP15428 266 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 IL7RP16871 459 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A6P19224 532 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 IMPDH1P20839 514 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 CYP2A7P20853 494 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A1P22309 533 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A4P22310 534 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 AKT2P31751 481 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 VIPR1P32241 457 aa4.29□□□□□ -1.72
SF3B1-202ENST00000409915 UGT1A3P35503 534 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms