RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 ADAM10O14672 748 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 TP53I11O14683 189 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 EMC8O43402 210 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 NKX2-2O95096 273 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 CNR1P21554 472 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 MST1P26927 711 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 ZFP36L2P47974 494 aaKnown RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 HBA1P69905 142 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 RPP38P78345 283 aaKnown RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 PHC1P78364 1004 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 LRRC74AQ0VAA2 488 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 ZNF155Q12901 538 aaPredicted RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 IGFBP7Q16270 282 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 CPSF7Q8N684 471 aaKnown RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 GOT1L1Q8NHS2 421 aaPredicted RBP12.86□□□□□ -0.35
GYPC-203ENST00000409836 OMA1Q96E52 524 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 GPR137Q96N19 417 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 CCDC115Q96NT0 180 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 TCF7L2Q9NQB0 619 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 DUSP22Q9NRW4 184 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 GPATCH2Q9NW75 528 aa12.86□□□□□ -0.35
GYPC-203ENST00000409836 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 PINLYPA6NC86 204 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 DIAPH2O60879 1101 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 TRIM3O75382 744 aaPredicted RBP12.85□□□□□ -0.35
GYPC-203ENST00000409836 SOX30O94993 753 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 SNX4O95219 450 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 C6orf47O95873 294 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 P04436 131 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 IL12AP29459 219 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 LCN1P31025 176 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 PIGAP37287 484 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 IDH3AP50213 366 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 PNLIPRP2P54317 469 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 FBXW4P57775 412 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
GYPC-203ENST00000409836 NNATQ16517 81 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
GYPC-203ENST00000409836 FAM174BQ3ZCQ3 159 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 VPS26BQ4G0F5 336 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 KRTCAP3Q53RY4 240 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 SPANXN4Q5MJ08 99 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 ANXA8L1Q5VT79 327 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 FAM47EQ6ZV65 393 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 NUP54Q7Z3B4 507 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 CHERPQ8IWX8 916 aaKnown RBP12.85□□□□□ -0.35
GYPC-203ENST00000409836 FAM13CQ8NE31 585 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 MIPOL1Q8TD10 442 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 DIO2Q92813 273 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 TMEM41AQ96HV5 264 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 COL21A1Q96P44 957 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 STACQ99469 402 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 TTTY12Q9BZ98 90 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 ZNF703Q9H7S9 590 aaPredicted RBP12.85□□□□□ -0.35
GYPC-203ENST00000409836 CXorf36Q9H7Y0 433 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 Q9N2J8 555 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 QPCTLQ9NXS2 382 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 BTNL2Q9UIR0 455 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 ABCG2Q9UNQ0 655 aa12.85□□□□□ -0.35
GYPC-203ENST00000409836 SPTBN1Q01082 2364 aaKnown RBP12.85□□□□□ -0.35
GYPC-203ENST00000409836 ANKUB1A6NFN9 424 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 UBDO15205 165 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 POLR3GO15318 223 aaPredicted RBP12.84□□□□□ -0.35
GYPC-203ENST00000409836 UGT2B11O75310 529 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 IGHG3P01860 377 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 PGRP06401 933 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 NGFRP08138 427 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 GPC1P35052 558 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 PTGDSP41222 190 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 CASP3P42574 277 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 ATP4BP51164 291 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 UFM1P61960 85 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 MRPS22P82650 360 aaKnown RBP12.84□□□□□ -0.35
GYPC-203ENST00000409836 ALDH6A1Q02252 535 aaKnown RBP12.84□□□□□ -0.35
GYPC-203ENST00000409836 EFR3AQ14156 821 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 RCAN2Q14206 197 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.84□□□□□ -0.35
GYPC-203ENST00000409836 CMPK2Q5EBM0 449 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 FNDC7Q5VTL7 733 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 AP1ARQ63HQ0 302 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 TMEM198Q66K66 360 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 SLC44A2Q8IWA5 706 aaPredicted RBP12.84□□□□□ -0.35
GYPC-203ENST00000409836 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 NUDT8Q8WV74 236 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
GYPC-203ENST00000409836 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms