RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 NHSL2Q5HYW2 709 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 LGI4Q8N135 537 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 FBXO15Q8NCQ5 510 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 OR52N2Q8NGI0 321 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 MCOLN3Q8TDD5 553 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 ZNF559Q9BR84 538 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 LRTM1Q9HBL6 345 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 ANKHQ9HCJ1 492 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 PAPOLBQ9NRJ5 636 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 PNPLA3Q9NST1 481 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 COMMD3-BMI1R4GMX3 469 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 AKAP6Q13023 2319 aa11.78□□□□□ -0.52
CHRNA1-205ENST00000409542 SERTM1A2A2V5 107 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 NPIPB8E9PQR5 432 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 SOCS2O14508 198 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 KCNH1O95259 989 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 KRT6AP02538 564 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 KRT6BP04259 564 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 HOXD4P09016 255 aaPredicted RBP11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 HRH2P25021 359 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 CASP2P42575 452 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 KRT6CP48668 564 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 CYB561P49447 251 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 HNMTP50135 292 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 NUP107P57740 925 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 TAS2R50P59544 299 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 BTG2P78543 158 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 ROR2Q01974 943 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 GK3PQ14409 553 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 EPHX4Q8IUS5 362 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 SLC13A3Q8WWT9 602 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 ASB5Q8WWX0 329 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 TFAP2CQ92754 450 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 HAUS8Q9BT25 410 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 CXXC4Q9H2H0 198 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 PARVBQ9HBI1 364 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 SLAMF8Q9P0V8 285 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 ZNF490Q9ULM2 529 aaPredicted RBP11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 PCDHGB4Q9UN71 923 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 PDE10AQ9Y233 779 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 PCDHGB5Q9Y5G0 923 aa11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 PHF3Q92576 2039 aaKnown RBP11.77□□□□□ -0.52
CHRNA1-205ENST00000409542 ZNF407Q9C0G0 2248 aa11.77□□□□□ -0.53
CHRNA1-205ENST00000409542 SAC3D1A6NKF1 404 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 A8MUA0 341 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 TFECO14948 347 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CLDN9O95484 217 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 IL6P05231 212 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CDH1P12830 882 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PRPH2P23942 346 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 GSTT1P30711 240 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CHRNB4P30926 498 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 TRHRP34981 398 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 GDF5P43026 501 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SLC6A12P48065 614 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 HLCSP50747 726 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 NR1H2P55055 460 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 GPR85P60893 370 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 TBPL1P62380 186 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PMPCAQ10713 525 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 IMPG1Q17R60 797 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CAPN13Q6MZZ7 669 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 MBOAT1Q6ZNC8 495 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 UBE2R2Q712K3 238 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 FKBP9P1Q75LS8 142 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 MDGA2Q7Z553 956 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ASPGQ86U10 573 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SATL1Q86VE3 508 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 TGIF2LYQ8IUE0 185 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 FAM9CQ8IZT9 166 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 EID3Q8N140 333 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CBR4Q8N4T8 237 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 NFAM1Q8NET5 270 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 TNIP2Q8NFZ5 429 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 C16orf52Q8NHV5 167 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 FAM110BQ8TC76 370 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DGCR14Q96DF8 476 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 NSMCE2Q96MF7 247 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DPY30Q9C005 99 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DEFB127Q9H1M4 99 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 RPF2Q9H7B2 306 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 SLC24A3Q9HC58 644 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 KCNJ16Q9NPI9 418 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 C1orf109Q9NX04 203 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ARL15Q9NXU5 204 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ZNF639Q9UID6 485 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 HRNRQ86YZ3 2850 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PINLYPA6NC86 204 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 H3BNH8 94 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 DLGAP1O14490 977 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 ACOX3O15254 700 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 CHST10O43529 356 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 B4GALT2O60909 372 aa11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 RSL1D1O76021 490 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-205ENST00000409542 PGM3O95394 542 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms