RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ALOX5P09917 674 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 KHKP50053 298 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 PSPHP78330 225 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 DUSP8Q13202 625 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 EBPQ15125 230 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 CDC73Q6P1J9 531 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 RNF130Q86XS8 419 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 C9orf40Q8IXQ3 194 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 PGAM4Q8N0Y7 254 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 SIMC1Q8NDZ2 872 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 ADAMTS15Q8TE58 950 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 JADE3Q92613 823 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 GPATCH1Q9BRR8 931 aaKnown RBP15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 WWTR1Q9GZV5 400 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF223Q9UK11 482 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 L3MBTL1Q9Y468 752 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF451Q9Y4E5 1061 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF462Q96JM2 2506 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 MASP2O00187 686 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 ASNA1O43681 348 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 PDGFAP04085 211 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 GPX2P18283 190 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC6A2P23975 617 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 CRATP43155 626 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 PPICP45877 212 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 PSME3P61289 254 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 KLRB1Q12918 225 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 RGNQ15493 299 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 C8orf82Q6P1X6 216 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 LGI4Q8N135 537 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC5A8Q8N695 610 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 TEX19Q8NA77 164 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 RBM15BQ8NDT2 890 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 PNPT1Q8TCS8 783 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC9A6Q92581 669 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 HOXB13Q92826 284 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 TP53INP1Q96A56 240 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 VSTM2LQ96N03 204 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 BTBD9Q96Q07 612 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 GAL3ST4Q96RP7 486 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 STACQ99469 402 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 SMAD5Q99717 465 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 ECSITQ9BQ95 431 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC39A3Q9BRY0 314 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 LMF2Q9BU23 707 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 ITPAQ9BY32 194 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 LHPPQ9H008 270 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 Q9N2J8 555 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 SPAG4Q9NPE6 437 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 DUSP22Q9NRW4 184 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 ANAPC2Q9UJX6 822 aa15.29■□□□□ 0.04
TSPAN4-208ENST00000409531 FRG2CA6NGY1 282 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 ACOX3O15254 700 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 ITGAMP11215 1152 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 PLA2G2AP14555 144 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 DRD5P21918 477 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 ITGA3P26006 1051 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 MTPNP58546 118 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC25A3Q00325 362 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 DNAL1Q4LDG9 190 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.28■□□□□ 0.048e-6■■■■■ 27.9
TSPAN4-208ENST00000409531 ATAD3BQ5T9A4 648 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 HPS6Q86YV9 775 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 KIF2BQ8N4N8 673 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 ADIPOR1Q96A54 375 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 HSPBAP1Q96EW2 488 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 C16orf58Q96GQ5 468 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 THOC3Q96J01 351 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 LCORQ96JN0 433 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 YIPF4Q9BSR8 244 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 SPATA9Q9BWV2 254 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 OR51I1Q9H343 314 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 PIGUQ9H490 435 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF552Q9H707 407 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 EXD2Q9NVH0 621 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 TEKT2Q9UIF3 430 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 DTX4Q9Y2E6 619 aa15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 GPR55Q9Y2T6 319 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-208ENST00000409531 TMEM247A6NEH6 219 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 GYG2O15488 501 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 DNAJA2O60884 412 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 NKX2-2O95096 273 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 AK1P00568 194 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 ALPPP05187 535 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 CPOXP36551 454 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 MAP3K8P41279 467 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 MVDP53602 400 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 NRG3P56975 720 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 RPS26P62854 115 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 PSG6Q00889 435 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 Q0VFX4 171 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 RAPSNQ13702 412 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 EXOSC6Q5RKV6 272 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 H3F3CQ6NXT2 135 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 TNFAIP8L2Q6P589 184 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 RINLQ6ZS11 566 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 YTHDF3Q7Z739 585 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 SERPINA11Q86U17 422 aa15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC44A2Q8IWA5 706 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-208ENST00000409531 DEFB107AQ8IZN7 70 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms