RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 OR6C76A6NM76 312 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 HMGN4O00479 90 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ITGA10O75578 1167 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 KRT75O95678 551 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 KRT16P08779 473 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ALOX5P09917 674 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 MAN2A2P49641 1150 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 RNF144AP50876 292 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 PSME3P61289 254 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ZNHIT3Q15649 155 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CDC73Q6P1J9 531 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 BHLHB9Q6PI77 547 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 IFNEQ86WN2 208 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 DEFB107AQ8IZN7 70 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 BEST3Q8N1M1 668 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ZNF441Q8N8Z8 693 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CDRT4Q8N9R6 151 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 OR52N2Q8NGI0 321 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 TMEM125Q96AQ2 219 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 LCORQ96JN0 433 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CMTM6Q9NX76 183 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 PLA2G3Q9NZ20 509 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 GPR55Q9Y2T6 319 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ACACBO00763 2458 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CPAMD8Q8IZJ3 1885 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CNTRLQ7Z7A1 2325 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 NPIPA5A0A0B4J1W7 369 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 PRAMEF27A3QJZ7 478 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 A8MVJ9 347 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 EVPLLA8MZ36 301 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 NPIPA7E9PJI5 369 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 NME4O00746 187 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 IGKV1D-16P01601 117 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 NPIPA8P0DM63 369 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CPOXP36551 454 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 SOX3P41225 446 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 PPICP45877 212 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 KHKP50053 298 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 RASSF2P50749 326 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 UCNP55089 124 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 FUT5Q11128 374 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 SYPL1Q16563 259 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 TBR1Q16650 682 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ZNF468Q5VIY5 522 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 IRAK1BP1Q5VVH5 260 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 C8orf82Q6P1X6 216 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 GPR155Q7Z3F1 870 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ZAR1Q86SH2 424 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC15A3Q8IY34 581 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC5A8Q8N695 610 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 COX18Q8N8Q8 333 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 FAM156AQ8NDB6 213 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 NUBPLQ8TB37 319 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 APOBEC4Q8WW27 367 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 TMBIM1Q969X1 311 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ROPN1LQ96C74 230 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 BTBD9Q96Q07 612 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 GPATCH1Q9BRR8 931 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 LRMDAQ9H2I8 198 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 GIN1Q9NXP7 522 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 ADA2Q9NZK5 511 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 CFL2Q9Y281 166 aa13.03□□□□□ -0.32
CHRNA1-204ENST00000409323 EXPH5Q8NEV8 1989 aa13.02□□□□□ -0.32
CHRNA1-204ENST00000409323 FRG2CA6NGY1 282 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 OR6B1O95007 311 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 TCN1P20061 433 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 ABCD3P28288 659 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 MSX2P35548 267 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 MAP3K8P41279 467 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 MLF1P58340 268 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 DSTNP60981 165 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 CYP51A1Q16850 503 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 RPS26P11Q5JNZ5 115 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 OR8K3Q8NH51 312 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 DNAJB8Q8NHS0 232 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 C1orf21Q9H246 121 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 ZNF552Q9H707 407 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 Q9N2J8 555 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 TAS2R1Q9NYW7 299 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 STMN3Q9NZ72 180 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 FLRT3Q9NZU0 649 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 CBLCQ9ULV8 474 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 L3MBTL1Q9Y468 752 aa13.02□□□□□ -0.33
CHRNA1-204ENST00000409323 CFAP73A6NFT4 308 aa13.01□□□□□ -0.33
CHRNA1-204ENST00000409323 ANKRD65E5RJM6 399 aa13.01□□□□□ -0.33
CHRNA1-204ENST00000409323 K7EM74 188 aa13.01□□□□□ -0.33
CHRNA1-204ENST00000409323 REM1O75628 298 aa13.01□□□□□ -0.33
CHRNA1-204ENST00000409323 NKX2-2O95096 273 aa13.01□□□□□ -0.33
CHRNA1-204ENST00000409323 BCHEP06276 602 aa13.01□□□□□ -0.33
CHRNA1-204ENST00000409323 IFI6P09912 130 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms