RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 FNDC9Q8TBE3 224 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 FBXW5Q969U6 566 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 PINK1Q9BXM7 581 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 ITPAQ9BY32 194 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 RAB17Q9H0T7 212 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 LRTM1Q9HBL6 345 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 LYARQ9NX58 379 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 LPAR3Q9UBY5 353 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 GDF2Q9UK05 429 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 DKKL1Q9UK85 242 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 PSAT1Q9Y617 370 aa11.55□□□□□ -0.56
CHRNA1-203ENST00000409219 A0A0A6YYD5 115 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 FAM95CA0A1B0GW59 222 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 ESYT3A0FGR9 886 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 ZIC3O60481 467 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 EEDO75530 441 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 PEPDP12955 493 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 S1PR1P21453 382 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 SUCLG1P53597 346 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 HMGCS1Q01581 520 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 DDX39BQ13838 428 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 FGFBP1Q14512 234 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 IFT81Q8WYA0 676 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 UTP11Q9Y3A2 253 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 MRPS18CQ9Y3D5 142 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 ZNF175Q9Y473 711 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 RNF115Q9Y4L5 304 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 MALRD1Q5VYJ5 2156 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
CHRNA1-203ENST00000409219 FREM1Q5H8C1 2179 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 ALPK2Q86TB3 2170 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 CADP27708 2225 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 POLR3GO15318 223 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 CCNT2O60583 730 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 TNFRSF21O75509 655 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 FAM153BP0C7A2 387 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 DPP4P27487 766 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 SERPINB1P30740 379 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 BSGP35613 385 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 FNTAP49354 379 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 CASP9P55211 416 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 VLDLRP98155 873 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 DR1Q01658 176 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 ZNF844Q08AG5 666 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 FAPQ12884 760 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 PON3Q15166 354 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 FAM153CQ494X1 144 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 RNASEH2BQ5TBB1 312 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 OR5M10Q6IEU7 315 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 OR52E8Q6IFG1 317 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 SULT1C3Q6IMI6 304 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 PPIL6Q8IXY8 311 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 SPATA6LQ8N4H0 392 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 PDPRQ8NCN5 879 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 OR7G1Q8NGA0 311 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 HUS1BQ8NHY5 278 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 SMAP2Q8WU79 429 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 UBE2E3Q969T4 207 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 PKNOX2Q96KN3 472 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 ERP44Q9BS26 406 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 ACTR6Q9GZN1 396 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 DERL2Q9GZP9 239 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 SHARPINQ9H0F6 387 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 WDR41Q9HAD4 459 aa11.53□□□□□ -0.56
CHRNA1-203ENST00000409219 A0A1W2PP18 115 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 C17orf51A8MQB3 221 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 PGRMC2O15173 223 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 ACOX3O15254 700 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 SEC14L5O43304 696 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 SPRY1O43609 319 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 WISP3O95389 354 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 FAM58BPP0C7Q3 252 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 EPB42P16452 691 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 ZNF16P17020 682 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 NT5EP21589 574 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 PIK3R1P27986 724 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 TRADDQ15628 312 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 PGGHGQ32M88 737 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 CDKL4Q5MAI5 379 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 C6orf163Q5TEZ5 329 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 GPSM1Q86YR5 675 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 ARIH2OSQ8N7S6 290 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 LCORQ96JN0 433 aaPredicted RBP11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 HS6ST2Q96MM7 605 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 TNFRSF13CQ96RJ3 184 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 MTERF1Q99551 399 aaKnown RBP11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 CENPKQ9BS16 269 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 NAT9Q9BTE0 207 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 PLA2G12AQ9BZM1 189 aa11.52□□□□□ -0.56
CHRNA1-203ENST00000409219 CLOCKO15516 846 aa11.51□□□□□ -0.57
CHRNA1-203ENST00000409219 KCNAB3O43448 404 aa11.51□□□□□ -0.57
CHRNA1-203ENST00000409219 AQP8O94778 261 aa11.51□□□□□ -0.57
CHRNA1-203ENST00000409219 SIX3O95343 332 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-203ENST00000409219 NEK2P51955 445 aa11.51□□□□□ -0.57
CHRNA1-203ENST00000409219 ARFIP1P53367 373 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms