RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 FBXL4Q9UKA2 621 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 AK6Q9Y3D8 172 aaKnown RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 HEPACAM2A8MVW5 462 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 GTPBP1O00178 669 aaKnown RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 HOXA2O43364 376 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 HCN1O60741 890 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 SOCS5O75159 536 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 RAB36O95755 333 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 RLN1P04808 185 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 RHOP08100 348 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 IL1RNP18510 177 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 AK4P27144 223 aaPredicted RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 ATXN7L3Q14CW9 347 aaPredicted RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 TOR1AIP1Q5JTV8 583 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 PLEKHS1Q5SXH7 462 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 HES5Q5TA89 166 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 MZT2BQ6NZ67 158 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 C11orf88Q6PI97 169 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 OR8J2Q8NGG1 315 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 OR6F1Q8NGZ6 308 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 CEP76Q8TAP6 659 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 GSDMCQ9BYG8 508 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 SPHK2Q9NRA0 654 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ING3Q9NXR8 418 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 OR51B4Q9Y5P0 310 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3DA0A087WVF3 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3IA0A087WXS9 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3EA0A087X179 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3KA0A087X1G2 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 A0A1W2PP55 124 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3FA6NER0 549 aaPredicted RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3LB9A6J9 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 FGBP02675 491 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3HP0C7X1 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 SNRPBP14678 240 aaKnown RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 PVRP15151 417 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ACSL1P33121 698 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ADH7P40394 386 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 OPRD1P41143 372 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 RFX2P48378 723 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 RAB15P59190 212 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ARPC4P59998 168 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 FCN2Q15485 313 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ZNF79Q15937 498 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ARHGAP15Q53QZ3 475 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3GQ6DHY5 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3CQ6IPX1 549 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 PGBD2Q6P3X8 592 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TBC1D3Q8IZP1 549 aaPredicted RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 LRRC17Q8N6Y2 441 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 NKD1Q969G9 470 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ZMYND19Q96E35 227 aaPredicted RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 TXNDC15Q96J42 360 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 MAPKAP1Q9BPZ7 522 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 C1GALT1Q9NS00 363 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 TNFRSF10DQ9UBN6 386 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 SEC14L4Q9UDX3 406 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 SRRDQ9UH36 339 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 ZNF346Q9UL40 294 aaKnown RBP7.85□□□□□ -1.15
SNX13-201ENST00000409076 SLC45A1Q9Y2W3 748 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 VWA8A3KMH1 1905 aa7.85□□□□□ -1.15
SNX13-201ENST00000409076 LYRM1O43325 122 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 MAGEA2P43356 314 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 GIPRP48546 466 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 ERVFC1P60507 584 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 VEZF1Q14119 521 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 FGL2Q14314 439 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 FAM46CQ5VWP2 391 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 ANKRD54Q6NXT1 300 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 CEACAM19Q7Z692 300 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 FGD2Q7Z6J4 655 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 LUZP2Q86TE4 346 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 REM2Q8IYK8 340 aaPredicted RBP7.84□□□□□ -1.15
SNX13-201ENST00000409076 PIAS4Q8N2W9 510 aaPredicted RBP7.84□□□□□ -1.15
SNX13-201ENST00000409076 FIBINQ8TAL6 211 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 ZNF431Q8TF32 576 aaPredicted RBP7.84□□□□□ -1.15
SNX13-201ENST00000409076 CRELD1Q96HD1 420 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 EVA1BQ9NVM1 165 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 KCMF1Q9P0J7 381 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 P2RX2Q9UBL9 471 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 MGAT4AQ9UM21 535 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 FLVCR2Q9UPI3 526 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 CELSR3Q9NYQ7 3312 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 FABP7O15540 132 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 CBSLP0DN79 551 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 BMP7P18075 431 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 HOXD10P28358 340 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 CBSP35520 551 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 HNRNPFP52597 415 aaKnown RBP7.84□□□□□ -1.15
SNX13-201ENST00000409076 TGM3Q08188 693 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 KCNAB1Q14722 419 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 SPATS1Q496A3 300 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 LRRC37A5PQ49AS3 106 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 SYT14P1Q58G82 188 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 DMRTC1Q5HYR2 192 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 PXDC1Q5TGL8 231 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 SAXO2Q658L1 398 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 LYPD4Q6UWN0 246 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 UBQLNLQ8IYU4 475 aa7.84□□□□□ -1.15
SNX13-201ENST00000409076 DENND6BQ8NEG7 585 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms