RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RNF175Q8N4F7 328 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SNX31Q8N9S9 440 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 TRPV3Q8NET8 790 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 WNT2BQ93097 391 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 KIAA1191Q96A73 305 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 MCUR1Q96AQ8 359 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 MS4A6EQ96DS6 147 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 TSPAN17Q96FV3 270 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 PTCHD1Q96NR3 888 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 CSF3RQ99062 836 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 MMP25Q9NPA2 562 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SACM1LQ9NTJ5 587 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 OLAHQ9NV23 265 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 DNAJC11Q9NVH1 559 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 CD274Q9NZQ7 290 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF69Q9UC07 566 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 PTBP2Q9UKA9 531 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 CLEC4AQ9UMR7 237 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 CLDN16Q9Y5I7 305 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 IGKV3D-11A0A0A0MRZ8 115 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 TRAV17A0A0B4J275 112 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 WIPF3A6NGB9 483 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 LRRC14BA6NHZ5 514 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 PSMD9O00233 223 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNHIT1O43257 154 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 LRRTM2O43300 516 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 ERI3O43414 337 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 STK16O75716 305 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 OR7A10O76100 309 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 DBTP11182 482 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 EDN3P14138 238 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 SELLP14151 372 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 ATF4P18848 351 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 TFEBP19484 476 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 CERS1P27544 350 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 TTKP33981 857 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 SPRP35270 261 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 IDUAP35475 653 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 PLA2G16P53816 162 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 CAV1Q03135 178 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 RIPPLY1Q0D2K3 151 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 XKR6Q5GH73 641 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 MROH9Q5TGP6 573 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 FAM219BQ5XKK7 198 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 OGFOD2Q6N063 350 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 FAM180AQ6UWF9 173 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 TBC1D19Q8N5T2 526 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 FAM47BQ8NA70 645 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 NFAM1Q8NET5 270 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 OR8H1Q8NGG4 311 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 NXNL1Q96CM4 212 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 ATOH8Q96SQ7 321 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 SLC29A1Q99808 456 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 ROPN1BQ9BZX4 212 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 NARFLQ9H6Q4 476 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 ROPN1Q9HAT0 212 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 KLHL1Q9NR64 748 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 TAS2R1Q9NYW7 299 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 NINJ2Q9NZG7 142 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 COPG2Q9UBF2 871 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 DAPK2Q9UIK4 370 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 SLC5A6Q9Y289 635 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 CROCCQ5TZA2 2017 aa9.01□□□□□ -0.97
NIF3L1-202ENST00000409020 TCRBV16S1A1N1A0A5B0 115 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 RTCAO00442 366 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 PLOD2O00469 737 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ASNA1O43681 348 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 CCNT2O60583 730 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 PRAMEF2O60811 474 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 PTP4A3O75365 173 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 CYC1P08574 325 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 MTHFD2P13995 350 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 CD96P40200 585 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 CSNK2BP67870 215 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 EEF1A1P68104 462 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 POU6F2P78424 691 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 ELOAQ14241 798 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 CDK10Q15131 360 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 EXT1Q16394 746 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 PDK4Q16654 411 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 LRRC36Q1X8D7 754 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 TMEM95Q3KNT9 176 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ESCO2Q56NI9 601 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 FAM76BQ5HYJ3 339 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 EEF1A1P5Q5VTE0 462 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 AADACL4Q5VUY2 407 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 C1QL3Q5VWW1 255 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SULT1C3Q6IMI6 304 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 RPUSD3Q6P087 351 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 C16orf54Q6UWD8 224 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF793Q6ZN11 406 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 C16orf47Q6ZP98 133 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 QSOX2Q6ZRP7 698 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 CLNKQ7Z7G1 428 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 GPR180Q86V85 440 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF227Q86WZ6 799 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 GALNT4Q8N4A0 578 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms