RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 POLR2IP36954 125 aaKnown RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 EMX1Q04741 257 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 RGS1Q08116 209 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 RPE65Q16518 533 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 NDUFA9Q16795 377 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 DGUOKQ16854 277 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 GALNT10Q86SR1 603 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 C17orf82Q86X59 251 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC44A2Q8IWA5 706 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 TRIM48Q8IWZ4 208 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 MFSD9Q8NBP5 474 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 OR2L5Q8NG80 312 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 OR52E1Q8NGJ3 308 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 OR5AK3PQ8NH89 298 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC37A2Q8TED4 501 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 CREB3L4Q8TEY5 395 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF354BQ96LW1 612 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 Q96MT0 163 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 FUNDC2Q9BWH2 189 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 BTBD2Q9BX70 525 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF717Q9BY31 904 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC35C2Q9NQQ7 365 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC9A8Q9Y2E8 581 aa12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 CFAP20Q9Y6A4 193 aaKnown RBP12.11□□□□□ -0.47
SMARCB1-203ENST00000407082 CCDC187A0A096LP49 1063 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 FEZF1A0PJY2 475 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 EFCAB10A6NFE3 127 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 RHPN2P1A8MT19 583 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 M0R3G1 203 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 FAAHO00519 579 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CASC3O15234 703 aaKnown RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CLPXO76031 633 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ADAP00813 363 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 VIPP01282 170 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ITGB2P05107 769 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 TFPTP0C1Z6 253 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CYP4B1P13584 511 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CSNK2A2P19784 350 aaPredicted RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 FMO3P31513 532 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 MPIP34949 423 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC19A1P41440 591 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CRISP3P54108 245 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 OLR1P78380 273 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 PRR5P85299 388 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 HHEXQ03014 270 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 EXOC3L2Q2M3D2 409 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ADPRMQ3LIE5 342 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 DCST1Q5T197 706 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ADGRF3Q8IZF5 1079 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 OR6C4Q8NGE1 309 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 FAR1Q8WVX9 515 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 TRUB1Q8WWH5 349 aaKnown RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 EXOSC8Q96B26 276 aaKnown RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 BARD1Q99728 777 aaKnown RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 DPH7Q9BTV6 452 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 DGCR6LQ9BY27 220 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 RACGAP1Q9H0H5 632 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 LIN28AQ9H9Z2 209 aaKnown RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CLN6Q9NWW5 311 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF624Q9P2J8 865 aaPredicted RBP12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 LRIT1Q9P2V4 623 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ERVK-18Q9QC07 812 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 CPNE7Q9UBL6 633 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 ACSL6Q9UKU0 697 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 SH3GLB1Q9Y371 365 aa12.1□□□□□ -0.47
SMARCB1-203ENST00000407082 A0A0G2JPF8 293 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 A0A1W2PPW3 197 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 CLDN24A6NM45 220 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 CLCA1A8K7I4 914 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 HNRNPCL2B2RXH8 293 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 HNRNPCL3B7ZW38 293 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 PPM1DO15297 605 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 NUDT21O43809 227 aaKnown RBP12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 XPNPEP2O43895 674 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 MFN2O95140 757 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 GABARAPO95166 117 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 OPN1SWP03999 348 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 BCHEP06276 602 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 HTR1AP08908 422 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 HNRNPCL4P0DMR1 293 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 NR2F1P10589 423 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 GLB1P16278 677 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF12P17014 697 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 HIST1H1TP22492 207 aaPredicted RBP12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 FASLGP48023 281 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 KCNJ5P48544 419 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 CRYBA2P53672 197 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 UGT2B15P54855 530 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 UBE2IP63279 158 aaKnown RBP12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 TUBA1BP68363 451 aa12.09□□□□□ -0.47
SMARCB1-203ENST00000407082 COX10Q12887 443 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms