RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ERVK-16P61578 105 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CBX1P83916 185 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CYCSP99999 105 aaKnown RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 KNOP1Q1ED39 458 aaKnown RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 PYHIN1Q6K0P9 492 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 PWWP2BQ6NUJ5 590 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 LRRC70Q7Z2Q7 622 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 SPEM1Q8N4L4 309 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 DRAXINQ8NBI3 349 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 RAET1EQ8TD07 263 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 MRGPRDQ8TDS7 321 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CNRIP1Q96F85 164 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 DUX3Q96PT4 197 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 F2RL3Q96RI0 385 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 USP28Q96RU2 1077 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 SECISBP2Q96T21 854 aaKnown RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 CLEC7AQ9BXN2 247 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 MED20Q9H944 212 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 KCNK13Q9HB14 408 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF346Q9UL40 294 aaKnown RBP4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 EMCNQ9ULC0 261 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 AP4B1Q9Y6B7 739 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 SNED1Q8TER0 1413 aa4.11□□□□□ -1.75
HMGB1P13-201ENST00000406019 LOC105371242A0A075B767 164 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 IGHV3-38A0A0C4DH36 116 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 MEIOCA2RUB1 952 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CCDC169A6NNP5 214 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NEDD8-MDP1E9PL57 170 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 F8VZ95 297 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 FBP2O00757 339 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CYB561D2O14569 222 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 SNNO75324 88 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 BCAS1O75363 584 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 SURF6O75683 361 aaKnown RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NEBLO76041 1014 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 TM7SF2O76062 418 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZFAND5O76080 213 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 FGFR1OPO95684 399 aaKnown RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CLDN1O95832 211 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CPN1P15169 458 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 FOSL2P15408 326 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NT5EP21589 574 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 TAGLN2P37802 199 aaKnown RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NDST2P52849 883 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 RPS27AP62979 156 aaKnown RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 TFDP1Q14186 410 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM189A2Q15884 450 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZSCAN26Q16670 478 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 UPP1Q16831 310 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 HLA-BQ31612 363 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 TMEM30BQ3MIR4 351 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 UNC50Q53HI1 259 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 BOLA3Q53S33 107 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CCDC183Q5T5S1 534 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 BHLHB9Q6PI77 547 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CARM1Q86X55 608 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 MYOCDQ8IZQ8 938 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR13C2Q8NGS9 318 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NANPQ8TBE9 248 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 BRSK1Q8TDC3 778 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 SPRYD4Q8WW59 207 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 SLC41A3Q96GZ6 507 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 CCT7Q99832 543 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 C19orf43Q9BQ61 176 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 APOOQ9BUR5 198 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 RBM4Q9BWF3 364 aaKnown RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 GPR174Q9BXC1 333 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 IQCGQ9H095 443 aaKnown RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 VCX2Q9H322 139 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 GPN2Q9H9Y4 310 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 SCRT2Q9NQ03 307 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM114A2Q9NRY5 505 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 KLRF1Q9NZS2 232 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 GHRLQ9UBU3 117 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 NIP7Q9Y221 180 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR10H1Q9Y4A9 318 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 ATP10DQ9P241 1426 aa4.1□□□□□ -1.75
HMGB1P13-201ENST00000406019 A0A087X002 238 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 NPIPA5A0A0B4J1W7 369 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PPIAL4CA0A0B4J2A2 164 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ESYT2A0FGR8 921 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 LRIT2A6NDA9 550 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 TMCO5BA8MYB1 307 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 NPIPA5E9PKD4 350 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZSCAN12O43309 604 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR1F1O43749 312 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 E2F6O75461 281 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 FRAT2O75474 233 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ADCY5O95622 1261 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 ANP32DO95626 131 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 IGSF6O95976 241 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 PAHP00439 452 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 CGAP01215 116 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 OPN1LWP04000 364 aa4.09□□□□□ -1.75
HMGB1P13-201ENST00000406019 CAPN1P07384 714 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms