RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 H3F3CQ6NXT2 135 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 LINC00696Q6ZRV3 163 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 PIGWQ7Z7B1 504 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 ANKRD46Q86W74 232 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 ZADH2Q8N4Q0 377 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 TMEM156Q8N614 296 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF321PQ8N8H1 164 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF615Q8N8J6 731 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 C17orf47Q8NEP4 570 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 NUP43Q8NFH3 380 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 OR7G2Q8NG99 324 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 OR9I1Q8NGQ6 314 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 PSMA8Q8TAA3 256 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 SFXN5Q8TD22 340 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 THAP3Q8WTV1 239 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-204ENST00000405578 TP53INP1Q96A56 240 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 CCDC115Q96NT0 180 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 MS4A4EQ96PG1 132 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 SMAD5Q99717 465 aaKnown RBP9.76□□□□□ -0.85
RPAIN-204ENST00000405578 UTP23Q9BRU9 249 aaKnown RBP9.76□□□□□ -0.85
RPAIN-204ENST00000405578 WWTR1Q9GZV5 400 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF552Q9H707 407 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-204ENST00000405578 SAR1AQ9NR31 198 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 ZCCHC3Q9NUD5 404 aaKnown RBP9.76□□□□□ -0.85
RPAIN-204ENST00000405578 MYOTQ9UBF9 498 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 FAF1Q9UNN5 650 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-204ENST00000405578 NTNG1Q9Y2I2 539 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 NDUFAF1Q9Y375 327 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 CAPN7Q9Y6W3 813 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 SCN3AQ9NY46 2000 aa9.76□□□□□ -0.85
RPAIN-204ENST00000405578 A0A1W2PP18 115 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 UPK1AO00322 258 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 NDUFAB1O14561 156 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ACOX3O15254 700 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ITGA10O75578 1167 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 SNRPB2P08579 225 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 UQCRC2P22695 453 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 SOX11P35716 441 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 KRT20P35900 424 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 CHI3L1P36222 383 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 PPICP45877 212 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 TRPC1P48995 793 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 TMED10P49755 219 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 CDK9P50750 372 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ANXA11P50995 505 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 SSR4P51571 173 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 WNT3P56703 355 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 MLF1P58340 268 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ARG2P78540 354 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 OC90Q02509 493 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 STX5Q13190 355 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 MMEL1Q495T6 779 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ZCCHC12Q6PEW1 402 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 OPN5Q6U736 354 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF621Q6ZSS3 439 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 MTDHQ86UE4 582 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 C9orf40Q8IXQ3 194 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 GPALPP1Q8IXQ4 340 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 DND1Q8IYX4 353 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 CLECL1Q8IZS7 167 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ARMC10Q8N2F6 343 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 SLC15A4Q8N697 577 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 CDRT4Q8N9R6 151 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 CCDC197Q8NCU1 140 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ST6GALNAC3Q8NDV1 305 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 DNAJB8Q8NHS0 232 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 NUDT8Q8WV74 236 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ASB15Q8WXK1 588 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 PSMF1Q92530 271 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 VPS33AQ96AX1 596 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 LCORQ96JN0 433 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 NMUR2Q9GZQ4 415 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF385DQ9H6B1 395 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 Q9N2J8 555 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 EQTNQ9NQ60 294 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 NTMQ9P121 344 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 LEF1Q9UJU2 399 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF223Q9UK11 482 aaPredicted RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 MRTO4Q9UKD2 239 aaKnown RBP9.75□□□□□ -0.85
RPAIN-204ENST00000405578 OSGIN2Q9Y236 505 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 B3GNT3Q9Y2A9 372 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 OR10H1Q9Y4A9 318 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 PCDHGB3Q9Y5G1 929 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 DOCK10Q96BY6 2186 aa9.75□□□□□ -0.85
RPAIN-204ENST00000405578 ANKHD1Q8IWZ3 2542 aaKnown RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 RNF103-CHMP3A0A140T963 221 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 DUXAA6NLW8 204 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 A8MVJ9 347 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 WWP2O00308 870 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 SCN2BO60939 215 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 ERN1O75460 977 aaKnown RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 OR2J2O76002 312 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 KRT75O95678 551 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 DRD5P21918 477 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 CYB561P49447 251 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 EMDP50402 254 aa9.74□□□□□ -0.85
RPAIN-204ENST00000405578 PSMD4P55036 377 aaKnown RBP9.74□□□□□ -0.85
RPAIN-204ENST00000405578 RPP38P78345 283 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms