RNA–Protein interactions for RNA: ENST00000404724.7

CDC45-202, Transcript of cell division cycle 45, humanhuman

TSL 2 BASIC

Gene CDC45, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-202ENST00000404724 WWTR1Q9GZV5 400 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 CCM2LQ9NUG4 571 aaPredicted RBP12.42□□□□□ -0.42
CDC45-202ENST00000404724 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 VPS29Q9UBQ0 182 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 KCNN3Q9UGI6 736 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 CNOT11Q9UKZ1 510 aaKnown RBP12.42□□□□□ -0.42
CDC45-202ENST00000404724 SLC12A4Q9UP95 1085 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 ASB4Q9Y574 426 aa12.42□□□□□ -0.42
CDC45-202ENST00000404724 A0A0A6YYD5 115 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 LSM1O15116 133 aaKnown RBP12.41□□□□□ -0.42
CDC45-202ENST00000404724 PROM1O43490 865 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 PEX11AO75192 247 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 CTAG2O75638 210 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 CT62P0C5K7 136 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 BSGP35613 385 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 FBXW4P57775 412 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 TGM3Q08188 693 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 ZNF267Q14586 743 aaPredicted RBP12.41□□□□□ -0.42
CDC45-202ENST00000404724 EBPQ15125 230 aaKnown RBP12.41□□□□□ -0.42
CDC45-202ENST00000404724 LSM12Q3MHD2 195 aaKnown RBP12.41□□□□□ -0.42
CDC45-202ENST00000404724 TMEM35AQ53FP2 167 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 SPDYAQ5MJ70 313 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 DCST1Q5T197 706 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 FNDC7Q5VTL7 733 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 SLC22A10Q63ZE4 541 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 NXNQ6DKJ4 435 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 PAOXQ6QHF9 649 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 CHSY3Q70JA7 882 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 LRRC25Q8N386 305 aaPredicted RBP12.41□□□□□ -0.42
CDC45-202ENST00000404724 SIMC1Q8NDZ2 872 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 TNIP2Q8NFZ5 429 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 OR5L2Q8NGL0 311 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 ACTRT2Q8TDY3 377 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 STON2Q8WXE9 905 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 RILPQ96NA2 401 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 TCF7L2Q9NQB0 619 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 NMRK1Q9NWW6 199 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 GIMAP2Q9UG22 337 aa12.41□□□□□ -0.42
CDC45-202ENST00000404724 NSD1Q96L73 2696 aaPredicted RBP12.4□□□□□ -0.42
CDC45-202ENST00000404724 DOCK7Q96N67 2140 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 NPIPB8E9PQR5 432 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 PGRMC2O15173 223 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 RSL1D1O76021 490 aaKnown RBP12.4□□□□□ -0.42
CDC45-202ENST00000404724 AIFM1O95831 613 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 FBXO45P0C2W1 286 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 CUL3Q13618 768 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 KIAA0040Q15053 153 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 GALNTL6Q49A17 601 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 ATP6AP1LQ52LC2 224 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 RFTN2Q52LD8 501 aaPredicted RBP12.4□□□□□ -0.42
CDC45-202ENST00000404724 C6orf136Q5SQH8 315 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
CDC45-202ENST00000404724 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 ULK2Q8IYT8 1036 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 PRR22Q8IZ63 422 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 MMP21Q8N119 569 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 FBXW8Q8N3Y1 598 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 APIPQ96GX9 242 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 PPP3R2Q96LZ3 170 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 CCDC28BQ9BUN5 200 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 EXO5Q9H790 373 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 LRTM1Q9HBL6 345 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 TEX10Q9NXF1 929 aaPredicted RBP12.4□□□□□ -0.42
CDC45-202ENST00000404724 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
CDC45-202ENST00000404724 SEC22BO75396 215 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 LBPP18428 481 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 PRPH2P23942 346 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 SOX18P35713 384 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 RAP1GDS1P52306 607 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 AGFG1P52594 562 aaKnown RBP12.39□□□□□ -0.43
CDC45-202ENST00000404724 PLIN5Q00G26 463 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 TBL3Q12788 808 aaKnown RBP12.39□□□□□ -0.43
CDC45-202ENST00000404724 ARSKQ6UWY0 536 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 ZNF441Q8N8Z8 693 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
CDC45-202ENST00000404724 RGMAQ96B86 450 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 RBM18Q96H35 190 aaKnown RBP12.39□□□□□ -0.43
CDC45-202ENST00000404724 POM121Q96HA1 1249 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 MRPL1Q9BYD6 325 aaKnown RBP12.39□□□□□ -0.43
CDC45-202ENST00000404724 ROGDIQ9GZN7 287 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 C1orf109Q9NX04 203 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
CDC45-202ENST00000404724 ARL2BPQ9Y2Y0 163 aa12.39□□□□□ -0.43
CDC45-202ENST00000404724 WDR1O75083 606 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 TRIM3O75382 744 aaPredicted RBP12.38□□□□□ -0.43
CDC45-202ENST00000404724 COX7A2P14406 83 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 BMP5P22003 454 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 DUSP8Q13202 625 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 CEBPEQ15744 281 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 WLSQ5T9L3 541 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
CDC45-202ENST00000404724 ZCCHC7Q8N3Z6 543 aaKnown RBP12.38□□□□□ -0.43
CDC45-202ENST00000404724 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 NEIL3Q8TAT5 605 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 SLC22A8Q8TCC7 542 aa12.38□□□□□ -0.43
CDC45-202ENST00000404724 RIT1Q92963 219 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms