RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 MED20Q9H944 212 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 MGAT4BQ9UQ53 548 aa10.43□□□□□ -0.74
SCFD2-202ENST00000401642 ZNF106Q9H2Y7 1883 aaKnown RBP10.43□□□□□ -0.74
SCFD2-202ENST00000401642 FAAHO00519 579 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ASNA1O43681 348 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PEX14O75381 377 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SDC2P34741 201 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ACTR1BP42025 376 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ACTR1AP61163 376 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TMEM52BQ4KMG9 183 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 C9orf50Q5SZB4 431 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PARM1Q6UWI2 310 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ABI3BPQ7Z7G0 1075 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ATCAYQ86WG3 371 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TBC1D19Q8N5T2 526 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TEX47Q8TBZ9 253 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ADAMTS15Q8TE58 950 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 FGF14Q92915 247 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 LINC00615Q96LM1 132 aaPredicted RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SMURF1Q9HCE7 757 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 A4GALTQ9NPC4 353 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TMEM74BQ9NUR3 256 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 APOBEC3BQ9UH17 382 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SSR3Q9UNL2 185 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ICKQ9UPZ9 632 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 A0A087WUU8 490 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 C2orf92A0A1B0GVN3 265 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 LRRC72A6NJI9 287 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 LDB3O75112 727 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SERPINI2O75830 405 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 EPPINO95925 133 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CHRNB1P11230 501 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 POLR2CP19387 275 aaPredicted RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CSTF2P33240 577 aaKnown RBP eCLIP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TRHRP34981 398 aaPredicted RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SLC15A1P46059 708 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 RAB25P57735 213 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 STXBP1P61764 594 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 COPZ1P61923 177 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 RPS25P62851 125 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 FBXO43Q4G163 708 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 KLHL12Q53G59 568 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 NXNL2Q5VZ03 156 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 KIAA1324Q6UXG2 1013 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TMPRSS11AQ6ZMR5 421 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PLEKHM3Q6ZWE6 761 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SLC30A8Q8IWU4 369 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TRIM48Q8IWZ4 208 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 BBS1Q8NFJ9 593 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 OR8J1Q8NGP2 316 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 UBASH3BQ8TF42 649 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 MS4A6EQ96DS6 147 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 RNFT2Q96EX2 444 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CRELD1Q96HD1 420 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 DIRAS2Q96HU8 199 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 COX14Q96I36 57 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SEMA4GQ9NTN9 838 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TBC1D29Q9UFV1 150 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CLEC4AQ9UMR7 237 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 RPL36Q9Y3U8 105 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CENPVL1A0A0U1RR11 272 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PRKNO60260 465 aaPredicted RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 TMCC2O75069 709 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CCNKO75909 580 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ALOX5P09917 674 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ZNF888P0CJ79 500 aaPredicted RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ATP5A1P25705 553 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 HMGA2P52926 109 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PDX1P52945 283 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 RPS7P62081 194 aaKnown RBP10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PPP2CBP62714 309 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PPP2CAP67775 309 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 FUT5Q11128 374 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 BAK1Q16611 211 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 NRMQ8IXM6 262 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 OR52I1Q8NGK6 324 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CDS1Q92903 461 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SLC17A9Q9BYT1 436 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 SAP130Q9H0E3 1048 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CLCA2Q9UQC9 943 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 CFL2Q9Y281 166 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 PEX16Q9Y5Y5 336 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 ZNF780BQ9Y6R6 833 aa10.42□□□□□ -0.74
SCFD2-202ENST00000401642 OR2W5A6NFC9 320 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 CEACAM5P06731 702 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 CSNK2A2P19784 350 aaPredicted RBP10.41□□□□□ -0.74
SCFD2-202ENST00000401642 CELP19835 753 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 ILKQ13418 452 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 IRF3Q14653 427 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 TIMM50Q3ZCQ8 353 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 AGAP7PQ5VUJ5 663 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 FIGNL1Q6PIW4 674 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 ADAMTSL4Q6UY14 1074 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 GLCCI1Q86VQ1 547 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 KIF18BQ86Y91 864 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 GRAMD2AQ8IUY3 354 aa10.41□□□□□ -0.74
SCFD2-202ENST00000401642 OR2L3Q8NG85 312 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms