RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 EIPR1Q53HC9 387 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 ARL13AQ5H913 290 aaPredicted RBP14.48□□□□□ -0.09
ATG4B-203ENST00000400772 C1orf185Q5T7R7 199 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 SLC30A6Q6NXT4 461 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 ANGPTL8Q6UXH0 198 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 SEM1Q6ZVN7 128 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 IKBIPQ70UQ0 350 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 LIX1Q8N485 282 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 MREGQ8N565 214 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 WDSUB1Q8N9V3 476 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 OR1J4Q8NGS1 313 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 SLC35A4Q96G79 324 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 COL21A1Q96P44 957 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 TIMP4Q99727 224 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 SPOCK3Q9BQ16 436 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 TREX2Q9BQ50 279 aaPredicted RBP14.48□□□□□ -0.09
ATG4B-203ENST00000400772 TMEM109Q9BVC6 243 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 OSBPL11Q9BXB4 747 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 PARD6BQ9BYG5 372 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 STMN4Q9H169 189 aaPredicted RBP14.48□□□□□ -0.09
ATG4B-203ENST00000400772 RUBCNLQ9H714 662 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 Q9UFV3 132 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 SLC6A5Q9Y345 797 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 ADGRG4Q8IZF6 3080 aa14.48□□□□□ -0.09
ATG4B-203ENST00000400772 C15orf38-AP3S2A0A0A6YYH1 394 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 FAM90A27PA6NNH2 459 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 KDM4EB2RXH2 506 aaPredicted RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 UPK1AO00322 258 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 LSM1O15116 133 aaKnown RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 TYROBPO43914 113 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 REM1O75628 298 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 PSMG1O95456 288 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 GABRA1P14867 456 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 ELAVL4P26378 380 aaKnown RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 PSG6Q00889 435 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 NHSL2Q5HYW2 709 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 WIPI1Q5MNZ9 446 aaPredicted RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 TMEM107Q6UX40 140 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 ZCCHC23Q6ZST2 131 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 LURAP1LQ8IV03 231 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 ULK2Q8IYT8 1036 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 CLYBLQ8N0X4 340 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 OR2L13Q8N349 312 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 OR10Q1Q8NGQ4 319 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 OR6Y1Q8NGX8 325 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 RNF138Q8WVD3 245 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 AMDHD1Q96NU7 426 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 ADOQ96SZ5 270 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 MIEF1Q9NQG6 463 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 NPDC1Q9NQX5 325 aaPredicted RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 TAS2R9Q9NYW1 312 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 C19orf53Q9UNZ5 99 aaPredicted RBP14.47□□□□□ -0.09
ATG4B-203ENST00000400772 TRAF6Q9Y4K3 522 aa14.47□□□□□ -0.09
ATG4B-203ENST00000400772 CSMD2Q7Z408 3487 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 FBN2P35556 2912 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 PRAMEF25A6NGN4 478 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 B4DXG7 233 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 SLITRK5O94991 958 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 HOXD4P09016 255 aaPredicted RBP14.46□□□□□ -0.09
ATG4B-203ENST00000400772 IGFBP2P18065 325 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 BMP7P18075 431 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 SDC1P18827 310 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 ETV4P43268 484 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 GAS1P54826 345 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 VASNQ6EMK4 673 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 ANKRD26P1Q6NSI1 321 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 LIX1LQ8IVB5 337 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 SLC44A2Q8IWA5 706 aaPredicted RBP14.46□□□□□ -0.09
ATG4B-203ENST00000400772 FAM83FQ8NEG4 500 aaPredicted RBP14.46□□□□□ -0.09
ATG4B-203ENST00000400772 TWIST2Q8WVJ9 160 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 TMCO6Q96DC7 493 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 ELP4Q96EB1 424 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 KLRF1Q9NZS2 232 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 SENP1Q9P0U3 644 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 BAIAP2L1Q9UHR4 511 aa14.46□□□□□ -0.09
ATG4B-203ENST00000400772 HCFC1P51610 2035 aa14.46□□□□□ -0.1
ATG4B-203ENST00000400772 AHRRA9YTQ3 701 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 PIP5K1BO14986 540 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 TBX19O60806 448 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 ABCB7O75027 752 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 COQ9O75208 318 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 BPGMP07738 259 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 NEFHP12036 1026 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 NTSP30990 170 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 ZFP36L2P47974 494 aaKnown RBP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 PNLIPRP2P54317 469 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 RPL38P63173 70 aaKnown RBP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 ZNF844Q08AG5 666 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 GAB1Q13480 694 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 ZNF385BQ569K4 471 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 DCST1Q5T197 706 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 CES4AQ5XG92 561 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 LARP4Q71RC2 724 aaKnown RBP eCLIP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 ZNF551Q7Z340 670 aaPredicted RBP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 GDF7Q7Z4P5 450 aa14.45□□□□□ -0.1
ATG4B-203ENST00000400772 WDR53Q7Z5U6 358 aaPredicted RBP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 YRDCQ86U90 279 aaKnown RBP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 CIDECQ96AQ7 238 aaPredicted RBP14.45□□□□□ -0.1
ATG4B-203ENST00000400772 EFHD2Q96C19 240 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms