RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ICOSLGO75144 302 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 PSMG1O95456 288 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 CHRNGP07510 517 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 GLI4P10075 376 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 PRF1P14222 555 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 TACR1P25103 407 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 PTPN6P29350 595 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 PNLIPRP2P54317 469 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 CORO7P57737 925 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 CRYZQ08257 329 aaKnown RBP13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 EFR3AQ14156 821 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 ARL13AQ5H913 290 aaPredicted RBP13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 NHSL2Q5HYW2 709 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 C1orf185Q5T7R7 199 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 DESI1Q6ICB0 168 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 ANGPTL8Q6UXH0 198 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 NPSR1Q6W5P4 371 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 GDF7Q7Z4P5 450 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 CLYBLQ8N0X4 340 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 OR1J4Q8NGS1 313 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 OR2T11Q8NH01 316 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 RNF138Q8WVD3 245 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 TMCO6Q96DC7 493 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 EGLN2Q96KS0 407 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 AMDHD1Q96NU7 426 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 SPOCK3Q9BQ16 436 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 TREX2Q9BQ50 279 aaPredicted RBP13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 ENKD1Q9H0I2 346 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 TUBB1Q9H4B7 451 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 GLIPR2Q9H4G4 154 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 KLRF1Q9NZS2 232 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 FIS1Q9Y3D6 152 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 V9GYY5 206 aaPredicted RBP13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 PDZD2O15018 2839 aa13.59□□□□□ -0.23
SMIM11A-203ENST00000399299 GNB5O14775 395 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 TYROBPO43914 113 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 REM1O75628 298 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 SDC1P18827 310 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 IL12BP29460 328 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 KRT20P35900 424 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 MC3RP41968 323 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 TRPC1P48995 793 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 MRPS22P82650 360 aaKnown RBP13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 PSG6Q00889 435 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 ZNF155Q12901 538 aaPredicted RBP13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 UGT3A2Q3SY77 523 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 VASNQ6EMK4 673 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 TMEM107Q6UX40 140 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 OR2L13Q8N349 312 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 TWIST2Q8WVJ9 160 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 PARD6BQ9BYG5 372 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 PRDM14Q9GZV8 571 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 GALNT9Q9HCQ5 603 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 TRAF6Q9Y4K3 522 aa13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 INTS1Q8N201 2190 aaKnown RBP13.58□□□□□ -0.24
SMIM11A-203ENST00000399299 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 AHRRA9YTQ3 701 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 TMEM233B4DJY2 109 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 UPK1AO00322 258 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 PDPK1O15530 556 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 NME6O75414 186 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 CBR3O75828 277 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 BPGMP07738 259 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 LINC00032P0C843 101 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 IGFBP2P18065 325 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 ETV4P43268 484 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 ASMTP46597 345 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 ZFP36L2P47974 494 aaKnown RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 RPL38P63173 70 aaKnown RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 TFF3Q07654 80 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 PDE7AQ13946 482 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 CYP27C1Q4G0S4 372 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 RFTN2Q52LD8 501 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 SH2D4BQ5SQS7 431 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 ZCCHC23Q6ZST2 131 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 LARP4Q71RC2 724 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 CCDC71Q8IV32 467 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 DDIASQ8IXT1 998 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 PM20D2Q8IYS1 436 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 OR6Y1Q8NGX8 325 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 ELP4Q96EB1 424 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 DTNBP1Q96EV8 351 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 ADOQ96SZ5 270 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 TIMP4Q99727 224 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 TRIM8Q9BZR9 551 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 REEP4Q9H6H4 257 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 KCNJ16Q9NPI9 418 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 DDX18Q9NVP1 670 aaKnown RBP13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 OR10H1Q9Y4A9 318 aa13.57□□□□□ -0.24
SMIM11A-203ENST00000399299 WIF1Q9Y5W5 379 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms