RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CNIH4Q9P003 139 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CLCA2Q9UQC9 943 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 OR1A2Q9Y585 309 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CCDC88CQ9P219 2028 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 OTOL1A6NHN0 477 aaPredicted RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 HMX3A6NHT5 357 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 SYT5O00445 386 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CASKO14936 926 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 FRS3O43559 492 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CCNYL3P0C7X3 344 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 IL12RB1P42701 662 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 CDH11P55287 796 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 ST3GAL3Q11203 375 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PRAMEF8Q5VWM4 474 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PRAMEF7Q5VXH5 474 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 RASSF6Q6ZTQ3 369 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 ACOT4Q8N9L9 421 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 SYT14Q8NB59 555 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PIGXQ8TBF5 258 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 KIAA1143Q96AT1 154 aaPredicted RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 FAM46AQ96IP4 442 aaKnown RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 TRMT61BQ9BVS5 477 aaKnown RBP12.31□□□□□ -0.44
PRAME-201ENST00000398741 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 PRSS16Q9NQE7 514 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 KLHL28Q9NXS3 571 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 ATG4BQ9Y4P1 393 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
PRAME-201ENST00000398741 A0A1W2PR48 441 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 POLR1CO15160 346 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 LRRTM2O43300 516 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 EMC8O43402 210 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 LATO43561 262 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 AIFM1O95831 613 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 TRAPPC2P0DI81 140 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 TRAPPC2BP0DI82 140 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 CSNK2A2P19784 350 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 TGM3Q08188 693 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 MLF2Q15773 248 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 ABHD17CQ6PCB6 329 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 VRK2Q86Y07 508 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 VWA5B2Q8N398 1253 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 OR52P1PQ8NH57 321 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 RFKQ969G6 155 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ZNF707Q96C28 371 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 CNRIP1Q96F85 164 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 ST6GAL2Q96JF0 529 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 OR7D2Q96RA2 312 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 RAB11FIP5Q9BXF6 653 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 C11orf54Q9H0W9 315 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 TRIM45Q9H8W5 580 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 CALML5Q9NZT1 146 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ASB4Q9Y574 426 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 COL4A3Q01955 1670 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 KDM4EB2RXH2 506 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 PKLRP30613 574 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 MPIP34949 423 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 AVPR1BP47901 424 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 PPP3R1P63098 170 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 CHRNEQ04844 493 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 DUSP2Q05923 314 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ZIC1Q15915 447 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 GAB4Q2WGN9 574 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 LCN1P1Q5VSP4 162 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 C16orf62Q7Z3J2 963 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 MRGPREQ86SM8 312 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ZFP41Q8N8Y5 198 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 OR2L8Q8NGY9 312 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ENKURQ8TC29 256 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 DEPDC7Q96QD5 511 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ARHGDIGQ99819 225 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 MBNL1Q9NR56 388 aaKnown RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 SEMA4GQ9NTN9 838 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 CXXC1Q9P0U4 656 aaPredicted RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 COMMD3Q9UBI1 195 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 KCNK6Q9Y257 313 aa12.3□□□□□ -0.44
PRAME-201ENST00000398741 SF3B6Q9Y3B4 125 aaKnown RBP12.3□□□□□ -0.44
PRAME-201ENST00000398741 GPR89AB7ZAQ6 455 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 C4orf51C9J302 202 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 CH25HO95992 272 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 GPR89BP0CG08 455 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 LIMS3P0CW19 117 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 LIMS4P0CW20 117 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 HOXB3P14651 431 aaPredicted RBP12.29□□□□□ -0.44
PRAME-201ENST00000398741 GNSP15586 552 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 ATP5A1P25705 553 aaKnown RBP12.29□□□□□ -0.44
PRAME-201ENST00000398741 CERS1P27544 350 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 SSTR4P31391 388 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 MC3RP41968 323 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 SLC1A3P43003 542 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 FABP5Q01469 135 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 QPRTQ15274 297 aa12.29□□□□□ -0.44
PRAME-201ENST00000398741 TMEM44Q2T9K0 475 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms