RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 OR2W6PQ8NHA6 318 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TMBIM1Q969X1 311 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 NTNG2Q96CW9 530 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 APOPT1Q96IL0 206 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 METTL2AQ96IZ6 378 aaKnown RBP12.25□□□□□ -0.45
VCX3A-202ENST00000398729 COL21A1Q96P44 957 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 NODALQ96S42 347 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TRMOQ9BU70 441 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TNFRSF12AQ9NP84 129 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 MKS1Q9NXB0 559 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TAS2R9Q9NYW1 312 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TAS2R7Q9NYW3 318 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 Q9UFV3 132 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 HCFC1P51610 2035 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 PRAMEF25A6NGN4 478 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SLC28A1O00337 649 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SNPHO15079 494 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 COQ9O75208 318 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SEC22BO75396 215 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SLITRK5O94991 958 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 JUNP05412 331 aaKnown RBP12.24□□□□□ -0.45
VCX3A-202ENST00000398729 CT45A8P0DMV1 189 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 CT45A9P0DMV2 189 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 MSX1P28360 303 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 PTPN6P29350 595 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 IL12BP29460 328 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 NTSP30990 170 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 ADH7P40394 386 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 PTGDSP41222 190 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 NCBP2P52298 156 aaKnown RBP eCLIP12.24□□□□□ -0.45
VCX3A-202ENST00000398729 CORO7P57737 925 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 VSNL1P62760 191 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 TFF3Q07654 80 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 CRYZQ08257 329 aaKnown RBP12.24□□□□□ -0.45
VCX3A-202ENST00000398729 IFFO1Q0D2I5 559 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SF3B4Q15427 424 aaKnown RBP eCLIP12.24□□□□□ -0.45
VCX3A-202ENST00000398729 CT45A2Q5DJT8 189 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 ARHGAP21Q5T5U3 1957 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 RIPPLY2Q5TAB7 128 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 IKBIPQ70UQ0 350 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 HOMEZQ8IX15 550 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 OR7G2Q8NG99 324 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SLC35A4Q96G79 324 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 VSTM2LQ96N03 204 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 TIMP4Q99727 224 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 GATA5Q9BWX5 397 aaPredicted RBP12.24□□□□□ -0.45
VCX3A-202ENST00000398729 FOLH1BQ9HBA9 442 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 GALNT9Q9HCQ5 603 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
VCX3A-202ENST00000398729 C1orf109Q9NX04 203 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 SLC6A5Q9Y345 797 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 CCL27Q9Y4X3 112 aa12.24□□□□□ -0.45
VCX3A-202ENST00000398729 A0A087WV62 115 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 NPIPB8E9PQR5 432 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 AZIN1O14977 448 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 RGS14O43566 566 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 NME6O75414 186 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 CBR3O75828 277 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 CHEK2O96017 543 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 NEFHP12036 1026 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 IGFBP2P18065 325 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 PRPH2P23942 346 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 GCKP35557 465 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 ZNF155Q12901 538 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 EFR3AQ14156 821 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 KIAA0040Q15053 153 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 EIPR1Q53HC9 387 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 NHSL2Q5HYW2 709 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 WIPI1Q5MNZ9 446 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 VASNQ6EMK4 673 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 TRABD2AQ86V40 505 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 SLC44A2Q8IWA5 706 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 CLYBLQ8N0X4 340 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 FAM83FQ8NEG4 500 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 DTNBP1Q96EV8 351 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 ADOQ96SZ5 270 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 ROPN1BQ9BZX4 212 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 PRDM14Q9GZV8 571 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 ROPN1Q9HAT0 212 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 LRTM1Q9HBL6 345 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 MAPRE3Q9UPY8 281 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 EXO1Q9UQ84 846 aaKnown RBP12.23□□□□□ -0.45
VCX3A-202ENST00000398729 CAMK2AQ9UQM7 478 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 FIS1Q9Y3D6 152 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 OR10H1Q9Y4A9 318 aa12.23□□□□□ -0.45
VCX3A-202ENST00000398729 HSPB2A8KAH6 182 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 PLOD2O00469 737 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 TSPAN2O60636 221 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 EPPINO95925 133 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 ACTL6AO96019 429 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 BMP7P18075 431 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 ALDH3A1P30838 453 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 MC3RP41968 323 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 PNLIPRP2P54317 469 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms