RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SH3BGRL2Q9UJC5 107 aa15.3■□□□□ 0.04
APTR-201ENST00000398043 BOKQ9UMX3 212 aaPredicted RBP15.3■□□□□ 0.04
APTR-201ENST00000398043 MEMO1Q9Y316 297 aa15.3■□□□□ 0.04
APTR-201ENST00000398043 PKDREJQ9NTG1 2253 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 DOCK7Q96N67 2140 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 A1L4Q6 167 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 OR6C70A6NIJ9 312 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 SCAMP2O15127 329 aaKnown RBP15.29■□□□□ 0.04
APTR-201ENST00000398043 SUSD5O60279 629 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 COQ9O75208 318 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 SNNO75324 88 aaPredicted RBP15.29■□□□□ 0.04
APTR-201ENST00000398043 MAPK1P28482 360 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 RPL14P50914 215 aaKnown RBP15.29■□□□□ 0.04
APTR-201ENST00000398043 C21orf58P58505 322 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 PSPHP78330 225 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 EMX2Q04743 252 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 PLCXD2Q0VAA5 305 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 STX3Q13277 289 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 SLC10A1Q14973 349 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 IL23RQ5VWK5 629 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 MAMDC2Q7Z304 686 aaPredicted RBP15.29■□□□□ 0.04
APTR-201ENST00000398043 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 OR7A2PQ8NGA2 310 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 OR4N2Q8NGD1 307 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 NUDT8Q8WV74 236 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 TUBGCP3Q96CW5 907 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 TMEM41AQ96HV5 264 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 LMF2Q9BU23 707 aaKnown RBP15.29■□□□□ 0.04
APTR-201ENST00000398043 C1orf50Q9BV19 199 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 ACKR4Q9NPB9 350 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 KIAA1549Q9HCM3 1950 aa15.29■□□□□ 0.04
APTR-201ENST00000398043 NAV2Q8IVL1 2488 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 INTS1Q8N201 2190 aaKnown RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 OR14I1A6ND48 311 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 AQP7O14520 342 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 PRPS2P11908 318 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 CDK9P50750 372 aaKnown RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 CASP6P55212 293 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 RPP38P78345 283 aaKnown RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 HSPB3Q12988 150 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 SNTA1Q13424 505 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 MLC1Q15049 377 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 PDCD2Q16342 344 aaPredicted RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 EXOSC6Q5RKV6 272 aaKnown RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 HHATQ5VTY9 493 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 HIST2H2BCQ6DN03 193 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 PAOXQ6QHF9 649 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 NCCRP1Q6ZVX7 275 aaPredicted RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 SLC44A2Q8IWA5 706 aaPredicted RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 FNDC5Q8NAU1 212 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 PHF10Q8WUB8 498 aaKnown RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 ARL8AQ96BM9 186 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 GIMAP5Q96F15 307 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 ZBED6CLQ96FA7 236 aaPredicted RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 ZNF597Q96LX8 424 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 COL21A1Q96P44 957 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 AKTIPQ9H8T0 292 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 SIRT3Q9NTG7 399 aaPredicted RBP15.28■□□□□ 0.04
APTR-201ENST00000398043 PNPOQ9NVS9 261 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 SH3BP4Q9P0V3 963 aa15.28■□□□□ 0.04
APTR-201ENST00000398043 UNC79Q9P2D8 2635 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 E9PLN8 166 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 PRRG2O14669 202 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 HCN1O60741 890 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 ABCB7O75027 752 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 ICOSLGO75144 302 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 LAMP1P11279 417 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 G6PDP11413 515 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 PTPN6P29350 595 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 PNLIPRP2P54317 469 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 CYP27C1Q4G0S4 372 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 AGBL2Q5U5Z8 902 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 TMEM198Q66K66 360 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 SLC30A6Q6NXT4 461 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 MTFR2Q6P444 385 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 C3P1Q6ZMU1 363 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 R3HCC1LQ7Z5L2 792 aaKnown RBP15.27■□□□□ 0.04
APTR-201ENST00000398043 CAMKMTQ7Z624 323 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 CD163Q86VB7 1156 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 MED12LQ86YW9 2145 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 MARVELD2Q8N4S9 558 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 KRTCAP2Q8N6L1 136 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 PSMA8Q8TAA3 256 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 PAIP2Q9BPZ3 127 aaKnown RBP15.27■□□□□ 0.04
APTR-201ENST00000398043 VKORC1Q9BQB6 163 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 MEAF6Q9HAF1 191 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 DDX18Q9NVP1 670 aaKnown RBP15.27■□□□□ 0.04
APTR-201ENST00000398043 SPRR3Q9UBC9 169 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 C15orf41Q9Y2V0 281 aa15.27■□□□□ 0.04
APTR-201ENST00000398043 HEATR5AQ86XA9 2040 aa15.26■□□□□ 0.03
APTR-201ENST00000398043 B4DXG7 233 aa15.26■□□□□ 0.03
APTR-201ENST00000398043 REM1O75628 298 aa15.26■□□□□ 0.03
APTR-201ENST00000398043 HPNP05981 417 aa15.26■□□□□ 0.03
APTR-201ENST00000398043 TPOP07202 933 aa15.26■□□□□ 0.03
APTR-201ENST00000398043 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
APTR-201ENST00000398043 EFNA1P20827 205 aaPredicted RBP15.26■□□□□ 0.03
APTR-201ENST00000398043 PRPS1L1P21108 318 aa15.26■□□□□ 0.03
APTR-201ENST00000398043 HPCAL1P37235 193 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms