RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 AADACL4Q5VUY2 407 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.31
NUP98-204ENST00000397004 SZRD1Q7Z422 152 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 PLA2G15Q8NCC3 412 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 OR11H4Q8NGC9 324 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 DTD2Q96FN9 168 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 FAM46AQ96IP4 442 aaKnown RBP13.08□□□□□ -0.31
NUP98-204ENST00000397004 TRDV1A0A1B0GX56 115 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 ISM1B1AKI9 464 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 SYPP08247 313 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
NUP98-204ENST00000397004 SUN3Q8TAQ9 357 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 IRF7Q92985 503 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 AMDHD1Q96NU7 426 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 FNDC11Q9BVV2 318 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 KLHL31Q9H511 634 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 SLCO1C1Q9NYB5 712 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 IL36AQ9UHA7 158 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 SLC30A4O14863 429 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 CXCL10P02778 98 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 ACP5P13686 325 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 OMPP47874 163 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 HIST2H2AA3Q6FI13 130 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.32
NUP98-204ENST00000397004 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 SIRT6Q8N6T7 355 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 ENKD1Q9H0I2 346 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 RHBGQ9H310 441 aa13.08□□□□□ -0.32
NUP98-204ENST00000397004 CXorf51AA0A1B0GTR3 108 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 QSOX1O00391 747 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PGRMC2O15173 223 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PRMT2P55345 433 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 WSCD2Q2TBF2 565 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 MINDY4Q4G0A6 757 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 SHISA5Q8N114 240 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PCDHGB7Q9Y5F8 929 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 UBXN7O94888 489 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 FUT1P19526 365 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 THBS2P35442 1172 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 DEFB103AP81534 67 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 HTRA3P83110 453 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 COX10Q12887 443 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 SPDYE7PQ495Y7 208 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 LINC01555Q8NAE3 123 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 SPRYD4Q8WW59 207 aaPredicted RBP13.07□□□□□ -0.32
NUP98-204ENST00000397004 UFD1Q92890 307 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 TRIM63Q969Q1 353 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 MAP6Q96JE9 813 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 WNT6Q9Y6F9 365 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 A0A0A6YYJ9 748 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 J3QRE1 110 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 SOCS6O14544 535 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 CDC42EP2O14613 210 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 CCL16O15467 120 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PI15O43692 258 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PIP5K1CO60331 668 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 OR2B3O76000 313 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 NR2F6P10588 404 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 ACADMP11310 421 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 GNSP15586 552 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 MYL12AP19105 171 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PRKAG1P54619 331 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 ARPC4P59998 168 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 PPP3R1P63098 170 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 GPR176Q14439 515 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 HCN1O60741 890 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 CRYZL1O95825 349 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 NNMTP40261 264 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
NUP98-204ENST00000397004 STXBP1P61764 594 aaKnown RBP13.07□□□□□ -0.32
NUP98-204ENST00000397004 RIN1Q13671 783 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 DUSP6Q16828 381 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 KIAA1161Q6NSJ0 714 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 OR11H7Q8NGC8 314 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 SMAP2Q8WU79 429 aaPredicted RBP13.07□□□□□ -0.32
NUP98-204ENST00000397004 C6orf106Q9H6K1 298 aaPredicted RBP13.07□□□□□ -0.32
NUP98-204ENST00000397004 ASF1AQ9Y294 204 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 CSNK1G3Q9Y6M4 447 aa13.07□□□□□ -0.32
NUP98-204ENST00000397004 TBX19O60806 448 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 NR2F1P10589 423 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 BUD31P41223 144 aaPredicted RBP13.06□□□□□ -0.32
NUP98-204ENST00000397004 SMSP52788 366 aa13.06□□□□□ -0.32
NUP98-204ENST00000397004 OR10A3P58181 314 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms