RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 GK3PQ14409 553 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 MRM1Q6IN84 353 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 CBLL1Q75N03 491 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 MCATQ8IVS2 390 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 ST13P4Q8IZP2 240 aaPredicted RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 MMP21Q8N119 569 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 CISD2Q8N5K1 135 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 ACOT4Q8N9L9 421 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 PNPT1Q8TCS8 783 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 TMBIM1Q969X1 311 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 SMIM10Q96HG1 83 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 BARD1Q99728 777 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 ZBTB20Q9HC78 741 aaPredicted RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 PRDM9Q9NQV7 894 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 ENAMQ9NRM1 1142 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 GPATCH2Q9NW75 528 aa16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 ERRFI1Q9UJM3 462 aaPredicted RBP16.29■□□□□ 0.2
TNFSF13-205ENST00000396545 CNTRLQ7Z7A1 2325 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 H0YGG7 62 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 FAM58BPP0C7Q3 252 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 ZNF23P17027 643 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 ALAS2P22557 587 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 MMP11P24347 488 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 ARSFP54793 590 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 ARF3P61204 181 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 SKP1P63208 163 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 MERTKQ12866 999 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 AIMP2Q13155 320 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 SLC36A3Q495N2 470 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 TBPL2Q6SJ96 375 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 Q6ZS92 163 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 TTLL10Q6ZVT0 673 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 EIF3MQ7L2H7 374 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 UTP15Q8TED0 518 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 TBC1D20Q96BZ9 403 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 SERINC2Q96SA4 455 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 SLC35A5Q9BS91 424 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 KLHL31Q9H511 634 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 EPS8L2Q9H6S3 715 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 WDR54Q9H977 334 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 ATP13A2Q9NQ11 1180 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 RPS6KA6Q9UK32 745 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 UTS2RQ9UKP6 389 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 PCDHGA10Q9Y5H3 936 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 SLC22A7Q9Y694 548 aa16.28■□□□□ 0.2
TNFSF13-205ENST00000396545 TNFRSF21O75509 655 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 TNFAIP8O95379 198 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 CST1P01037 141 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 ALBP02768 609 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 SMIM18P0DKX4 95 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 RBBP4Q09028 425 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 FADDQ13158 208 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 SLAMF1Q13291 335 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 TMEM214Q6NUQ4 689 aaKnown RBP16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 COX15Q7KZN9 410 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 OVCH1Q7RTY7 1134 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 CLEC4FQ8N1N0 589 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 SVOPLQ8N434 492 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 ZADH2Q8N4Q0 377 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 OR5P2Q8WZ92 322 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 ZNF285Q96NJ3 590 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 SPSB2Q99619 263 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 ADI1Q9BV57 179 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 SLC26A1Q9H2B4 701 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 RAD21L1Q9H4I0 556 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 MS4A12Q9NXJ0 267 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 SMPD3Q9NY59 655 aaPredicted RBP16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 PHF11Q9UIL8 331 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 FBXL4Q9UKA2 621 aa16.27■□□□□ 0.2
TNFSF13-205ENST00000396545 DSCR3O14972 297 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 HPRP00739 348 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 NUDT7P0C024 238 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 ALOX12P18054 663 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 ALDH3A2P51648 485 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 DAG1Q14118 895 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 LRRC23Q53EV4 343 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 TCTE1Q5JU00 501 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 YOD1Q5VVQ6 348 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 ZNF793Q6ZN11 406 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 CSNK1A1LQ8N752 337 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 KCT2Q8NC54 265 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 C11orf65Q8NCR3 313 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 TMEM38AQ9H6F2 299 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 CUTCQ9NTM9 273 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 USE1Q9NZ43 259 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 NTNG1Q9Y2I2 539 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 CREBBPQ92793 2442 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 DOCK10Q96BY6 2186 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 MDC1Q14676 2089 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 LOC105369274A0A096LPK9 316 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 LOC102723532A0A0G2JNH3 316 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 ANKUB1A6NFN9 424 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 PLOD2O00469 737 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 SOCS6O14544 535 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 CLDN1O95832 211 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 LINGO3P0C6S8 592 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 UQCRC2P22695 453 aa16.26■□□□□ 0.19
TNFSF13-205ENST00000396545 MYF6P23409 242 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms