RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CAMK1GQ96NX5 476 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 OR2M4Q96R27 311 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 AIF1LQ9BQI0 150 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 UQCC2Q9BRT2 126 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 TBCDQ9BTW9 1192 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZNF700Q9H0M5 742 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 TTYH1Q9H313 450 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 RNF121Q9H920 327 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SLC23A2Q9UGH3 650 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PSORS1C1Q9UIG5 152 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RPS6KA6Q9UK32 745 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ELF5Q9UKW6 265 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 SNX7Q9UNH6 387 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PCYT1BQ9Y5K3 369 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 GMPPBQ9Y5P6 360 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ELOVL7A1L3X0 281 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 TBC1D3BA6NDS4 549 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 CCDC182A6NF36 153 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 LINC01387J3KSC0 135 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 CRCPO75575 148 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 CDK1P06493 297 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 CD72P21854 359 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RPS4Y1P22090 263 aaKnown RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 CPN2P22792 545 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MYL9P24844 172 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PDHA2P29803 388 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PEBP1P30086 187 aaKnown RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 LCN1P31025 176 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RGS6P49758 472 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 CRYBA2P53672 197 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 DSTNP60981 165 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 IRF8Q02556 426 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RPE65Q16518 533 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MPEG1Q2M385 716 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 BTBD16Q32M84 506 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZMAT1Q5H9K5 638 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ARMCX4Q5H9R4 360 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SHEQ5VZ18 495 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 HEPHL1Q6MZM0 1159 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 FAM92BQ6ZTR7 304 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MRGPREQ86SM8 312 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 LURAP1LQ8IV03 231 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 TRIM48Q8IWZ4 208 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ENTHD1Q8IYW4 607 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 LGI4Q8N135 537 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 LINC00469Q8N7U9 141 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZNF675Q8TD23 568 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 C16orf78Q8WTQ4 265 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 DNAJA4Q8WW22 397 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 DNASE2BQ8WZ79 361 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SHDQ96IW2 340 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 C7orf34Q96L11 122 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 PPM1MQ96MI6 270 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 WDR92Q96MX6 357 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 ZNF578Q96N58 590 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 COPS4Q9BT78 406 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 HDHD5Q9BXW7 423 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 OR2AG1Q9H205 316 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SMOC1Q9H4F8 434 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 RIBC2Q9H4K1 309 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 SMURF1Q9HCE7 757 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 MBNL1Q9NR56 388 aaKnown RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 FARSBQ9NSD9 589 aaKnown RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 SLC23A1Q9UHI7 598 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 NCKAP1Q9Y2A7 1128 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 POLR3HQ9Y535 204 aaPredicted RBP5.05□□□□□ -1.6
VPS41-203ENST00000395969 ASB4Q9Y574 426 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 KMT2EQ8IZD2 1858 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 NINQ8N4C6 2090 aa5.05□□□□□ -1.6
VPS41-203ENST00000395969 A0A087WV62 115 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 A0A1W2PQ09 198 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CIB4A0PJX0 185 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 LRRC72A6NJI9 287 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 B9A039 149 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SMLR1H3BR10 107 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 J3KRW8 73 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 KPNA3O00505 521 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 PLD2O14939 933 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ETHE1O95571 254 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 EPHX1P07099 455 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GAAP10253 952 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ARAFP10398 606 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GABRG2P18507 467 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ALAS2P22557 587 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 S100A3P33764 101 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SLC19A1P41440 591 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GABRA4P48169 554 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 MAN2A2P49641 1150 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ETV1P50549 477 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 DLX5P56178 289 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 RHAGQ02094 409 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GPR68Q15743 365 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TAB1Q15750 504 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 VMACQ2NL98 169 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GLYR1Q49A26 553 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 YOD1Q5VVQ6 348 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 RAET1GQ6H3X3 334 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 IGF2-ASQ6U949 168 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms