RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 KRTCAP2Q8N6L1 136 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ENKURQ8TC29 256 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 LMX1AQ8TE12 382 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PIK3R3Q92569 461 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 UTP4Q969X6 686 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HSPBAP1Q96EW2 488 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF419Q96HQ0 510 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MUS81Q96NY9 551 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ASPNQ9BXN1 380 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PLAC1Q9HBJ0 212 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF304Q9HCX3 659 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 KCND3Q9UK17 655 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CDH10Q9Y6N8 788 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR52A4PA6NMU1 304 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF99A8MXY4 864 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ACOT8O14734 319 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SNX4O95219 450 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CD160O95971 181 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MT-ND5P03915 603 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PKLRP30613 574 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 VSX2P58304 361 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 IL11RAQ14626 422 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF613Q6PF04 617 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RBM44Q6ZP01 1051 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SLC2A12Q8TD20 617 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 DEPDC7Q96QD5 511 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ITPAQ9BY32 194 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ACOT13Q9NPJ3 140 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RASSF1Q9NS23 344 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MED16Q9Y2X0 877 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHGA8Q9Y5G5 932 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FAM149AA5PLN7 773 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 WISP3O95389 354 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GBX2P52951 348 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GMFBP60983 142 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 USP53Q70EK8 1073 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KLHL36Q8N4N3 616 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PROKR2Q8NFJ6 384 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR2T4Q8NH00 348 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KCTD12Q96CX2 325 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C1GALT1C1Q96EU7 318 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CDADC1Q9BWV3 514 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C6orf62Q9GZU0 229 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CAPN10Q9HC96 672 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MAP10Q9P2G4 905 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 EXOSC1Q9Y3B2 195 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PCDH15Q96QU1 1955 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 hCG_2039718K7EN88 272 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PLPP1O14494 284 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 JMJD7P0C870 316 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 NAGAP17050 411 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CAPZBP47756 277 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GCGRP47871 477 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TRA2AQ13595 282 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 COX4I2Q96KJ9 171 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SGCZQ96LD1 299 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GAL3ST4Q96RP7 486 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GORASP1Q9BQQ3 440 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FN3KQ9H479 309 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FGF22Q9HCT0 170 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ABCA12Q86UK0 2595 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FXYD1O00168 92 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 IDH3BO43837 385 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF846Q147U1 533 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TBCEQ15813 527 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SLC36A3Q495N2 470 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RETREG3Q86VR2 466 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CARM1Q86X55 608 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM151AQ8N4L1 468 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SLC38A5Q8WUX1 472 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KLK6Q92876 244 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ELF4Q99607 663 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 DEFB126Q9BYW3 111 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PAIP1Q9H074 479 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GPN2Q9H9Y4 310 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FAM118AQ9NWS6 357 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ERVK-11Q9UQG0 969 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MEGF11A6BM72 1044 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CLCA1A8K7I4 914 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 EFCAB9A8MZ26 197 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MAPK11Q15759 364 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TOR1AIP1Q5JTV8 583 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C6orf52Q5T4I8 152 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FAAH2Q6GMR7 532 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 JAZF1Q86VZ6 243 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 BAHD1Q8TBE0 780 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ARRDC3Q96B67 414 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 NXPE2Q96DL1 559 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MCHR1Q99705 422 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GDF15Q99988 308 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ADAMTS6Q9UKP5 1117 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 MAGED1Q9Y5V3 778 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 A3GALT2U3KPV4 340 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C9JVG2 144 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PDLIM1O00151 329 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 SCN2BO60939 215 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 KIR2DL1P43626 348 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF41P51814 821 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GPR18Q14330 331 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 C14orf28Q4W4Y0 310 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms