RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ARRB2P32121 409 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 VSX2P58304 361 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 TBPL1P62380 186 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 COL19A1Q14993 1142 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 RAB12Q6IQ22 244 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 NOXRED1Q6NXP6 359 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 NXPE4Q6UWF7 544 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 TMEM207Q6UWW9 146 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SSX9Q7RTT3 188 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SLC9B2Q86UD5 537 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 DEFB119Q8N690 84 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 OR5J2Q8NH18 312 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SLC9A6Q92581 669 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 PRAP1Q96NZ9 151 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 IL17FQ96PD4 163 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SSX3Q99909 188 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 TRAF4Q9BUZ4 470 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 AKAP7Q9P0M2 348 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 CYB5R1Q9UHQ9 305 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 MN1Q10571 1320 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 TPRP12270 2363 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 PPP6CO00743 305 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 LDOC1O95751 146 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 HPGDP15428 266 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CD1EP15812 388 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 HRH2P25021 359 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CTHP32929 405 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 MC2RQ01718 297 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 KCNC4Q03721 635 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNF169Q14929 603 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 SPHARQ15513 63 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CTU2Q2VPK5 515 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 SOWAHCQ53LP3 525 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 COQ5Q5HYK3 327 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 OR4F3Q6IEY1 312 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 LETMD1Q6P1Q0 360 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SLC16A12Q6ZSM3 486 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 GKN2Q86XP6 184 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 RNF130Q86XS8 419 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 MARCH9Q86YJ5 346 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 LGI4Q8N135 537 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CRIPAKQ8N1N5 446 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SYNPOQ8N3V7 929 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 DNAJC5GQ8N7S2 189 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 NANPQ8TBE9 248 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 TSACCQ96A04 125 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 DUS3LQ96G46 650 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNF300Q96RE9 604 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 DCLRE1CQ96SD1 692 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNF607Q96SK3 696 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 DPYSL5Q9BPU6 564 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 NTMT1Q9BV86 223 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 EPHX3Q9H6B9 360 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 PLAC1Q9HBJ0 212 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNF69Q9UC07 566 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SLC23A1Q9UHI7 598 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 USP22Q9UPT9 525 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 RPL36Q9Y3U8 105 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 hCG_1807616A0A1W2PRN6 198 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 C1orf196B1AJZ1 125 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 B4DGG1 531 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CEP290O15078 2479 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SSX4O60224 188 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 PRMT3O60678 531 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 EEDO75530 441 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 HRGP04196 525 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 BCKDHAP12694 445 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 GGT1P19440 569 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 EFNA1P20827 205 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 PSMD4P55036 377 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 FOXA1P55317 472 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 PSMA6P60900 246 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 RAB2AP61019 212 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 S100A12P80511 92 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 MEF2AQ02078 507 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 IRF4Q15306 451 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNHIT3Q15649 155 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 TBCEQ15813 527 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 OCLNQ16625 522 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 DUOXA1Q1HG43 343 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SPANXN4Q5MJ08 99 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 GCNT6Q5T4J0 391 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 C12orf40Q86WS4 652 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 GPR135Q8IZ08 494 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 DPP10Q8N608 796 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 WDSUB1Q8N9V3 476 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 C11orf65Q8NCR3 313 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 MOSPD2Q8NHP6 518 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 LKAAEAR1Q8TD35 194 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZBED6CLQ96FA7 236 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNF578Q96N58 590 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 BTBD2Q9BX70 525 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CACNG6Q9BXT2 260 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ZNF768Q9H5H4 540 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 RNF167Q9H6Y7 350 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 KRCC1Q9NPI7 259 aaPredicted RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 RBFOX1Q9NWB1 397 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 SDHAF2Q9NX18 166 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 POFUT2Q9Y2G5 429 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms