RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.7■□□□□ 0.58
SHANK1-203ENST00000391813 GXYLT2A0PJZ3 443 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ACOT7O00154 380 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 SNAPINO95295 136 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ADORA3P0DMS8 318 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 MC2RQ01718 297 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 TCEAL6Q6IPX3 200 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 FAM86B1Q8N7N1 296 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM185AQ8NFB2 350 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 WDR26Q9H7D7 661 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 MRPL15Q9P015 296 aaKnown RBP18.7■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM221A6NGB7 291 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 EMC8O43402 210 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 GLP1RP43220 463 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 WDR5P61964 334 aaKnown RBP18.69■□□□□ 0.58
SHANK1-203ENST00000391813 GRHL2Q6ISB3 625 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 CELF2-AS1Q8N7Q2 184 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 C3orf58Q8NDZ4 430 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 OR56B4Q8NH76 319 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 ATOH8Q96SQ7 321 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 GPRC5BQ9NZH0 403 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 B4GALT6Q9UBX8 382 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 PSORS1C1Q9UIG5 152 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 GJB5O95377 273 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 CNN2Q99439 309 aaKnown RBP18.69■□□□□ 0.58
SHANK1-203ENST00000391813 TTC34A8MYJ7 566 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM189-UBE2V1I3L0A0 370 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 IFNA2P01563 188 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 CYP17A1P05093 508 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 CERS1P27544 350 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 PTH2RP49190 550 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 MPP7Q5T2T1 576 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 SPATC1Q76KD6 591 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 SVBPQ8N300 66 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 Q8N9G6 341 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-203ENST00000391813 SLC7A6Q92536 515 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 GAL3ST4Q96RP7 486 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 HAPLN2Q9GZV7 340 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 C8orf33Q9H7E9 229 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-203ENST00000391813 SLC2A4RGQ9NR83 387 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 FAM155AB1AL88 458 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-203ENST00000391813 GMDSO60547 372 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 DRD2P14416 443 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 ADPRMQ3LIE5 342 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF534Q76KX8 674 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 RASGEF1AQ8N9B8 481 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 HAVCR2Q8TDQ0 301 aa18.69■□□□□ 0.58
SHANK1-203ENST00000391813 PTGESO14684 152 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 GMFGO60234 142 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 GPR37L1O60883 481 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 CSTBP04080 98 aaKnown RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 S100PP25815 95 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 MAT2AP31153 395 aaKnown RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 RAB8AP61006 207 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ARF3P61204 181 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ARF1P84077 181 aaKnown RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ARSIQ5FYB1 569 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF529Q6P280 563 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 OR51A7Q8NH64 312 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 HUS1BQ8NHY5 278 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 CD200R1Q8TD46 325 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ISL2Q96A47 359 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ECHDC3Q96DC8 303 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 SLC38A3Q99624 504 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ASF1BQ9NVP2 202 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ACTR10Q9NZ32 417 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ANKRD28O15084 1053 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 NR2C1P13056 603 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 DHPSP49366 369 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ELOAQ14241 798 aaKnown RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 GFOD2Q3B7J2 385 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 MINDY4Q4G0A6 757 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 KDELC1Q6UW63 502 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 METTL21AQ8WXB1 218 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 APIPQ96GX9 242 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 MEPEQ9NQ76 525 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 BLOC1S5-TXNDC5H3BN57 136 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 H7C417 338 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 PROS1P07225 676 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 PREPP48147 710 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ARRB1P49407 418 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 CLCNKAP51800 687 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 C22orf39Q6P5X5 142 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 DHRS4L2Q6PKH6 230 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 SLC39A11Q8N1S5 342 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 FAM83FQ8NEG4 500 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 OR6N2Q8NGY6 317 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 SLC25A36Q96CQ1 311 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 DUS3LQ96G46 650 aaKnown RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 LRIG1Q96JA1 1093 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 CLMPQ9H6B4 373 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ELOVL2Q9NXB9 296 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 FBXL12Q9NXK8 326 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 COPS7AQ9UBW8 275 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 PCDHGA2Q9Y5H1 932 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 M0QZQ0 153 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ADH1BP00325 375 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 NUDT7P0C024 238 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 PTPN6P29350 595 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms