RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 NPIPA2E9PIF3 369 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 PDLIM1O00151 329 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 GPAA1O43292 621 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 GJB5O95377 273 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 HOXB7P09629 217 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 ALPIP09923 528 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLC35G4P0C7Q5 338 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLC35E2P0CK97 266 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 LAMP1P11279 417 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 ETS1P14921 441 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 GDF1P27539 372 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 PTPN4P29074 926 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLC25A1P53007 311 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 METAP1P53582 386 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 IL9RQ01113 521 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 ACSF3Q4G176 576 aaPredicted RBP3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 LDLRAP1Q5SW96 308 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 PNCKQ6P2M8 343 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 ARFGAP2Q8N6H7 521 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 MRAPQ8TCY5 172 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 TFB1MQ8WVM0 346 aaKnown RBP3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 TADA1Q96BN2 335 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 SIGLEC12Q96PQ1 595 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 OR5M11Q96RB7 305 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 CCT8L2Q96SF2 557 aa3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 CNOT2Q9NZN8 540 aaKnown RBP3.31□□□□□ -1.88
SNORA40.2-201ENST00000390847 A8MX80 341 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 G3V3Y1 287 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 SEC22BO75396 215 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 TGFAP01135 160 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 TSPAN8P19075 237 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 POU3F4P49335 361 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 STARD6P59095 220 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 CXCL6P80162 114 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 RAB35Q15286 201 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 LRIT3Q3SXY7 679 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 OLFML2AQ68BL7 652 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 C2orf66Q6UXQ4 117 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 HSCBQ8IWL3 235 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 ELMOD2Q8IZ81 293 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 MCOLN2Q8IZK6 566 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 Q8N9G6 341 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 TNFRSF19Q9NS68 423 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 DUS2Q9NX74 493 aaKnown RBP3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 KLRF1Q9NZS2 232 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 GHRLQ9UBU3 117 aa3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 BARX2Q9UMQ3 279 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.2-201ENST00000390847 ABCA7Q8IZY2 2146 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 TRBV7-9A0A0J9YWB2 115 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 LGALS8O00214 317 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 TSC22D2O75157 780 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 GAP43P17677 238 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 SDC1P18827 310 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 FASP25445 335 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 ACVR1BP36896 505 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 MDH2P40926 338 aaKnown RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 NOVP48745 357 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 STK19P49842 368 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 ATXN3P54252 364 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 MRPS6P82932 125 aaKnown RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZP4Q12836 540 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 SERTAD2Q14140 314 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 PDIA5Q14554 519 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 KARSQ15046 597 aaKnown RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 TGIF1Q15583 401 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 PKN2Q16513 984 aaKnown RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZSWIM7Q19AV6 140 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 QRICH1Q2TAL8 776 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 MEDAGQ5VYS4 303 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLX4IPQ5VYV7 408 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 DMKNQ6E0U4 476 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 CGB2Q6NT52 195 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 PAQR9Q6ZVX9 377 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 HDDC3Q8N4P3 179 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 OR56B1Q8NGI3 324 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 FNDC8Q8TC99 324 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 DQX1Q8TE96 717 aaKnown RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 C11orf24Q96F05 449 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 SAMD8Q96LT4 415 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 HCAR1Q9BXC0 346 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 NMNAT2Q9BZQ4 307 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 RAB17Q9H0T7 212 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 ZNF275Q9NSD4 429 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 MBD2Q9UBB5 411 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLC2A6Q9UGQ3 507 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 ODF2LQ9ULJ1 636 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 PLEKHA6Q9Y2H5 1048 aa3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 TP53BP1Q12888 1972 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.2-201ENST00000390847 TTC26A0AVF1 554 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 RASGRF2O14827 1237 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 SLC2A10O95528 541 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 IGFBP1P08833 259 aaPredicted RBP3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 CT45A10P0DMU9 189 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 IGFBP5P24593 272 aa3.28□□□□□ -1.88
SNORA40.2-201ENST00000390847 PTPN6P29350 595 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms