RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RPS7P62081 194 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 GRIN2CQ14957 1233 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 MPP7Q5T2T1 576 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 IDNKQ5T6J7 187 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 HACD4Q5VWC8 232 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC39A5Q6ZMH5 540 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 OAFQ86UD1 273 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 EIF4E3Q8N5X7 224 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF527Q8NB42 609 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 FGF11Q92914 225 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 FBXO44Q9H4M3 255 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 CYB5R1Q9UHQ9 305 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 TMEM5Q9Y2B1 443 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 PCDHGC4Q9Y5F7 938 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 GREB1Q4ZG55 1949 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ALDOBP05062 364 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ANXA5P08758 320 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 CALCRP30988 508 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 CDK6Q00534 326 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 BCL2L1Q07817 233 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 PUM1Q14671 1186 aaKnown RBP eCLIP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 FAM209BQ5JX69 171 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 PDSS1Q5T2R2 415 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 GPRC6AQ5T6X5 926 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF704Q6ZNC4 412 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ZBTB2Q8N680 514 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ADAMTS19Q8TE59 1207 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 INTS12Q96CB8 462 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ESRP2Q9H6T0 727 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 OR6C2Q9NZP2 312 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF282Q9UDV7 671 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 GPR160Q9UJ42 338 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC9A8Q9Y2E8 581 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 NINQ8N4C6 2090 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 A0A0D9SEW6 157 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 OR6C65A6NJZ3 312 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 OR12D1P0DN82 309 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF7P17097 686 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 RBMS1P29558 406 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SFRP5Q5T4F7 317 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ANXA8L1Q5VT79 327 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 BTN2A1Q7KYR7 527 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SIAH3Q8IW03 269 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ASB12Q8WXK4 309 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ELMOD3Q96FG2 381 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 PAWRQ96IZ0 340 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 DMRTA2Q96SC8 542 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC19A3Q9BZV2 496 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SPRTNQ9H040 489 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 TMEM38AQ9H6F2 299 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 C1GALT1Q9NS00 363 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 CBLCQ9ULV8 474 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 KCNK7Q9Y2U2 307 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 OR10H3O60404 316 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SOX30O94993 753 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ADRB1P08588 477 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ACP2P11117 423 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 HSD3B1P14060 373 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SDHBP21912 280 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 OPRD1P41143 372 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 CSKP41240 450 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 PCBP3P57721 371 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 EFNB1P98172 346 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 TAP2Q03519 686 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 RAB40BQ12829 278 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 HIST2H2AA3Q6FI13 130 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 CERS6Q6ZMG9 384 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 TMCO2Q7Z6W1 182 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 SERPINA9Q86WD7 417 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 MRPS24Q96EL2 167 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 RNFT2Q96EX2 444 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 ARL15Q9NXU5 204 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 PURGQ9UJV8 347 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 CCDC88CQ9P219 2028 aa13.82□□□□□ -0.2
VPS9D1-201ENST00000389386 CD8B2A6NJW9 211 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 L7N2F9 121 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 H2AFB1P0C5Y9 115 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CD8BP10966 210 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CR2P20023 1033 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 IDSP22304 550 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 PGBD2Q6P3X8 592 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 ALKAL2Q6UX46 152 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 IL20RBQ6UXL0 311 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 HTR3DQ70Z44 454 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 PRICKLE2Q7Z3G6 844 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 PAQR7Q86WK9 346 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 MCATQ8IVS2 390 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 SLC30A8Q8IWU4 369 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 CMIPQ8IY22 773 aa13.81□□□□□ -0.2
VPS9D1-201ENST00000389386 OR52N2Q8NGI0 321 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms