RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ZNF430Q9H8G1 570 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 KCNJ16Q9NPI9 418 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 MIEF1Q9NQG6 463 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 CHST12Q9NRB3 414 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 MTMR10Q9NXD2 777 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 SPHK1Q9NYA1 384 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 RBAKQ9NYW8 714 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 SLC17A7Q9P2U7 560 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 CTSFQ9UBX1 484 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF639Q9UID6 485 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 DAPK2Q9UIK4 370 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 HES2Q9Y543 173 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 R4GN57 208 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 ANKRD12Q6UB98 2062 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 HEG1Q9ULI3 1381 aa-1.35□□□□□ -2.63
RNU6-540P-201ENST00000384622 FRMPD3Q5JV73 1810 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ARID4BQ4LE39 1312 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 UBR2Q8IWV8 1755 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 A0A0G2JN53 185 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 MACROD2A1Z1Q3 448 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF320A2RRD8 509 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 MBLAC1A4D2B0 266 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 LRIT2A6NDA9 550 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SOCS1O15524 211 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SSSCA1O60232 199 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SOX15O60248 233 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SERPINB7O75635 380 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 GALTP07902 379 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 THRAP10827 490 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 CYP11B1P15538 503 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF7P17097 686 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 EPORP19235 508 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 TRIM21P19474 475 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZP3P21754 424 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 CD27P26842 260 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 CRKLP46109 303 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 NSFP46459 744 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 NRIP1P48552 1158 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF80P51504 273 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 PLXNA3P51805 1871 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 RBM5P52756 815 aaKnown RBP eCLIP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 RPS27AP62979 156 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF415Q09FC8 603 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 PDE6HQ13956 83 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 MVPQ14764 893 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 NONOQ15233 471 aaKnown RBP eCLIP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZKSCAN8Q15776 578 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ODF4Q2M2E3 257 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 KRTAP19-2Q3LHN2 52 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 RFTN2Q52LD8 501 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 VAX1Q5SQQ9 334 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 TMCO4Q5TGY1 634 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 AADACL4Q5VUY2 407 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 TMED8Q6PL24 325 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 STAC2Q6ZMT1 411 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 DPY19L2P2Q6ZN68 376 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 Q6ZS49 121 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SLC24A5Q71RS6 500 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SYT13Q7L8C5 426 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 CBWD2Q8IUF1 395 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 FAM114A1Q8IWE2 563 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 OSR2Q8N2R0 312 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 C11orf72Q8NBR9 251 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 C11orf65Q8NCR3 313 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 CNNM3Q8NE01 707 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 BBS1Q8NFJ9 593 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR11H4Q8NGC9 324 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR51L1Q8NGJ5 315 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR14L1PQ8NHC6 308 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SDR42E1Q8WUS8 393 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 DCUN1D4Q92564 292 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF566Q969W8 418 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 S100PBPQ96BU1 408 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 KTI12Q96EK9 354 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 C20orf166-AS1Q96NR2 134 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 SERPINB11Q96P15 392 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 MBOAT4Q96T53 435 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 RBBP8Q99708 897 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 C19orf24Q9BVV8 132 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 MRPL32Q9BYC8 188 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 DNAI2Q9GZS0 605 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 NEUROG2Q9H2A3 272 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 PIGMQ9H3S5 423 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 GLIPR2Q9H4G4 154 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 XKR8Q9H6D3 395 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 MMP26Q9NRE1 261 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 TM7SF3Q9NS93 570 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 GRHPRQ9UBQ7 328 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 PCYOX1Q9UHG3 505 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 ANKRD50Q9ULJ7 1429 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 TMEM5Q9Y2B1 443 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 AAR2Q9Y312 384 aaKnown RBP-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 FREM3P0C091 2139 aa-1.36□□□□□ -2.63
RNU6-540P-201ENST00000384622 DOCK10Q96BY6 2186 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 PLCH2O75038 1416 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 ARHGAP31Q2M1Z3 1444 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 LINC00854A0A1B0GVQ3 168 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 RGSL1A5PLK6 1076 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 FAM90A7PA6NKC0 464 aa-1.37□□□□□ -2.63
RNU6-540P-201ENST00000384622 FAM90A22PA8MWA6 464 aa-1.37□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms