RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 A0A1W2PPL8 197 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 SHISA3A0PJX4 238 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 RTCAO00442 366 aaKnown RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 FRS3O43559 492 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 POP4O95707 220 aaKnown RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 MT-ND4P03905 459 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 ALPPL2P10696 532 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
SDC1-202ENST00000381150 TEKQ02763 1124 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 HSF2Q03933 536 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 MFSD13AQ14CX5 517 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 TMEM81Q6P7N7 255 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 LYPD4Q6UWN0 246 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 WASH2PQ6VEQ5 465 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 PRSS42Q7Z5A4 293 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 RASGRP3Q8IV61 690 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 KREMEN2Q8NCW0 462 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 GANCQ8TET4 914 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 ASZ1Q8WWH4 475 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 ASB11Q8WXH4 323 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 CACNG6Q9BXT2 260 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 PPP1R3EQ9H7J1 279 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 TAS2R7Q9NYW3 318 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 CNIH4Q9P003 139 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 B4GALT6Q9UBX8 382 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 BAIAP2Q9UQB8 552 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 MAB21L2Q9Y586 359 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 PCDHGB7Q9Y5F8 929 aa13.06□□□□□ -0.32
SDC1-202ENST00000381150 C1orf226A1L170 272 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 FAM183AA6NL82 134 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 APOC3P02656 99 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 NAT2P11245 290 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ITGB7P26010 798 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ASMTP46597 345 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 MANFP55145 182 aaKnown RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 KIAA1024LP59773 190 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 TMEM215Q68D42 235 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ADIPOR2Q86V24 386 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 TOMM5Q8N4H5 51 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 OR7G3Q8NG95 312 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 CLP1Q92989 425 aaKnown RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 TCEAL4Q96EI5 215 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 SLC25A19Q9HC21 320 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 GFYI3L273 518 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 NUP62P37198 522 aaPredicted RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 MTNR1AP48039 350 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 SLC6A12P48065 614 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 HTRA3P83110 453 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 OC90Q02509 493 aaPredicted RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 SMARCD3Q6STE5 483 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ARL9Q6T311 187 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 RTL4Q6ZR62 310 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 C17orf107Q6ZR85 190 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 GPR135Q8IZ08 494 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ZNF366Q8N895 744 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 TMEM19Q96HH6 336 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ATF6BQ99941 703 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 PPA2Q9H2U2 334 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ZDHHC6Q9H6R6 413 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ELF5Q9UKW6 265 aaPredicted RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 WASH3PC4AMC7 463 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 GABRPO00591 440 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 GRM6O15303 877 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 CXCL14O95715 111 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ADAP00813 363 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ALDOBP05062 364 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 OR12D1P0DN82 309 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ACRP10323 421 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ACADMP11310 421 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ELAVL4P26378 380 aaKnown RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 DGKGP49619 791 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 LGALSLQ3ZCW2 172 aaPredicted RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 AGTRAPQ6RW13 159 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 SYT9Q86SS6 491 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 OXR1Q8N573 874 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 DUSP18Q8NEJ0 188 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 BBS10Q8TAM1 723 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 TMEM163Q8TC26 289 aa13.05□□□□□ -0.32
SDC1-202ENST00000381150 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 H2AFY2Q9P0M6 372 aaPredicted RBP13.05□□□□□ -0.32
SDC1-202ENST00000381150 PLXNA2O75051 1894 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 A0A0B4J203 849 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TMEM202A6NGA9 273 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 CCL16O15467 120 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 MPC2O95563 127 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 SLC16A8O95907 504 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TIMP1P01033 207 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 GIPRP48546 466 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 PFN3P60673 137 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 SLC3A1Q07837 685 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 GRIN2CQ14957 1233 aa13.04□□□□□ -0.32
SDC1-202ENST00000381150 TUSC1Q2TAM9 212 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms