RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 GLRX5Q86SX6 157 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 RHOXF1Q8NHV9 184 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 ASB12Q8WXK4 309 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 RORBQ92753 470 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 ZNF354BQ96LW1 612 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 GPR174Q9BXC1 333 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.13■□□□□ 0.17
PDX1-201ENST00000381033 TPSD1Q9BZJ3 242 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 ACTR10Q9NZ32 417 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 KCND3Q9UK17 655 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 ENTPD4Q9Y227 616 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 WDFY3Q8IZQ1 3526 aa16.13■□□□□ 0.17
PDX1-201ENST00000381033 OR2A25A4D2G3 310 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 CCDC85CA6NKD9 419 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 FCMRO60667 390 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 HOXC4P09017 264 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 ATXN8OSP0DMR3 200 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 ACVR2AP27037 513 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 PRKAR1BP31321 381 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 CSTF2P33240 577 aaKnown RBP eCLIP16.12■□□□□ 0.17
PDX1-201ENST00000381033 BUD31P41223 144 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 RNF144AP50876 292 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 CRISP3P54108 245 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 CXCR4P61073 352 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 SYT16Q17RD7 645 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 COLEC12Q5KU26 742 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 BCDIN3DQ7Z5W3 292 aaKnown RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 TRIM48Q8IWZ4 208 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 DENND6BQ8NEG7 585 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 OR5T3Q8NGG3 340 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 C10orf90Q96M02 699 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 TTYH1Q9H313 450 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 ZNF556Q9HAH1 456 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 C11orf16Q9NQ32 467 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 GPR55Q9Y2T6 319 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 TOR1BO14657 336 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 OR10H3O60404 316 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 ZIC2O95409 532 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 TYRP1P17643 537 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 CSNK2A2P19784 350 aaPredicted RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 PTNP21246 168 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 CTSKP43235 329 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 VBP1P61758 197 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 STXBP1P61764 594 aaKnown RBP16.12■□□□□ 0.17
PDX1-201ENST00000381033 EOGTQ5NDL2 527 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 NIPAL1Q6NVV3 410 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 FIGLAQ6QHK4 219 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 TBC1D19Q8N5T2 526 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 RAB2BQ8WUD1 216 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 GGHQ92820 318 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 ELP4Q96EB1 424 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 IL4I1Q96RQ9 567 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 COPS4Q9BT78 406 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 SP140LQ9H930 580 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 ANKMY1Q9P2S6 941 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 PSME2Q9UL46 239 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 A4GNTQ9UNA3 340 aa16.12■□□□□ 0.17
PDX1-201ENST00000381033 CLDN24A6NM45 220 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 AQP9O43315 295 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 NOL3O60936 208 aaKnown RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 LDB3O75112 727 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 STSP08842 583 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 GABRB1P18505 474 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 AKT2P31751 481 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 CNR2P34972 360 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 VRK2Q86Y07 508 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 SLC16A11Q8NCK7 471 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 NUP43Q8NFH3 380 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 OR7G2Q8NG99 324 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 NDNFQ8TB73 568 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 SLC37A2Q8TED4 501 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 ARSGQ96EG1 525 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 ZNF764Q96H86 408 aaPredicted RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 OR7D2Q96RA2 312 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 SIGLEC11Q96RL6 698 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 ZNF607Q96SK3 696 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 KCMF1Q9P0J7 381 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 CPNE7Q9UBL6 633 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 ENPP5Q9UJA9 477 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 PCDHGB1Q9Y5G3 927 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 LRP4O75096 1905 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 ABCA7Q8IZY2 2146 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 SOX18P35713 384 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 RPS15AP62244 130 aaKnown RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 MRPS15P82914 257 aaKnown RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 TAGLNQ01995 201 aaKnown RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 ILF3Q12906 894 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDX1-201ENST00000381033 DOC2BQ14184 412 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 DEFB110Q30KQ9 67 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 FBXO43Q4G163 708 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 SGK3Q96BR1 496 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 CNDP2Q96KP4 475 aaKnown RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 NECTIN4Q96NY8 510 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 GPA33Q99795 319 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 C8orf33Q9H7E9 229 aaPredicted RBP16.11■□□□□ 0.17
PDX1-201ENST00000381033 NTNG1Q9Y2I2 539 aa16.11■□□□□ 0.17
PDX1-201ENST00000381033 MPIP34949 423 aa16.1■□□□□ 0.17
PDX1-201ENST00000381033 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms