RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 FADS2O95864 444 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 IGFBP1P08833 259 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 DRD1P21728 446 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 AKT2P31751 481 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 MVDP53602 400 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 NFATC4Q14934 902 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 KLHL35Q6PF15 583 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 TMEM184AQ6ZMB5 413 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 PHC2Q8IXK0 858 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 OR52N2Q8NGI0 321 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ZG16BQ96DA0 208 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 SLC6A18Q96N87 628 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 NIPSNAP1Q9BPW8 284 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF700Q9H0M5 742 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 OR51I1Q9H343 314 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 RERGLQ9H628 205 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 NDUFAF4Q9P032 175 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ENTPD4Q9Y227 616 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 KCNE3Q9Y6H6 103 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 RP1P56715 2156 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 AIFM1O95831 613 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 HMGN2P05204 90 aaKnown RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 HIST1H1TP22492 207 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PKLRP30613 574 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 SLC5A2P31639 672 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 VSX2P58304 361 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 SELENOWP63302 87 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ADARB1P78563 741 aaKnown RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 REEP5Q00765 189 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MADCAM1Q13477 382 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PIN1Q13526 163 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 RAB39AQ14964 217 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 TTC23Q5W5X9 447 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 HIPK1Q86Z02 1210 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 LGI4Q8N135 537 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 SLC22A18ASQ8N1D0 253 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ABHD11Q8NFV4 315 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ZBED6CLQ96FA7 236 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CCDC3Q9BQI4 270 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ADAP2Q9NPF8 381 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 C1GALT1Q9NS00 363 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 KLHL9Q9P2J3 617 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 TMEFF2Q9UIK5 374 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 SLC6A14Q9UN76 642 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MRPS2Q9Y399 296 aaKnown RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PRAMEF25A6NGN4 478 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 H3BN98 237 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 HCRTR1O43613 425 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 HOXB9P17482 250 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CDH2P19022 906 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MAPK3P27361 379 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 NTSP30990 170 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 KNTC1P50748 2209 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MAZP56270 477 aaKnown RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 S100A12P80511 92 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 FOXK2Q01167 660 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ENPP2Q13822 863 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 HABP2Q14520 560 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 FAM205BPQ63HN1 556 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 LINC00518Q8N0U6 118 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 TSTD1Q8NFU3 115 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 GIPC3Q8TF64 312 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 RSC1A1Q92681 617 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MS4A6EQ96DS6 147 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MSLNLQ96KJ4 702 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 TIMM29Q9BSF4 260 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CRB3Q9BUF7 120 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PCBD2Q9H0N5 130 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 TMEM45AQ9NWC5 275 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 RSL24D1Q9UHA3 163 aaKnown RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 A0A1W2PPW3 197 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CLDN24A6NM45 220 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 P2RX6O15547 441 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 OR10H3O60404 316 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PRKAR1AP10644 381 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PSMB9P28065 219 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 APOFQ13790 326 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ARHGAP19Q14CB8 494 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 NNATQ16517 81 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 IFI44LQ53G44 452 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 EOGTQ5NDL2 527 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CCNJQ5T5M9 372 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ADAMTS16Q8TE57 1224 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 SLC37A2Q8TED4 501 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 PROX1Q92786 737 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 CNRIP1Q96F85 164 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 IL4I1Q96RQ9 567 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 TINAGL1Q9GZM7 467 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-201ENST00000379433 C11orf16Q9NQ32 467 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 MKLN1Q9UL63 735 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 ANGPT4Q9Y264 503 aa10.17□□□□□ -0.78
NEDD9-201ENST00000379433 NUPL2O15504 423 aaKnown RBP10.16□□□□□ -0.78
NEDD9-201ENST00000379433 F3P13726 295 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 AVPR1BP47901 424 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 POU6F2P78424 691 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-201ENST00000379433 CDC20Q12834 499 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 AGERQ15109 404 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 C6orf141Q5SZD1 244 aa10.16□□□□□ -0.78
NEDD9-201ENST00000379433 FAM92BQ6ZTR7 304 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms