RNA–Protein interactions for RNA: ENST00000377811.3

NDUFB11-202, Transcript of NADH:ubiquinone oxidoreductase subunit B11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB11, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB11-202ENST00000377811 PPP2R1BP30154 601 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 WNT3P56703 355 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 CORO7P57737 925 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 SNRPNP63162 240 aaKnown RBP12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 SAMD4BQ5PRF9 694 aaKnown RBP12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 MFSD4BQ5TF39 518 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 FAM180BQ6P0A1 224 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 C3P1Q6ZMU1 363 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 SZRD1Q7Z422 152 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 OR4K14Q8NGD5 310 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 MIEF2Q96C03 454 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 CLPTM1LQ96KA5 538 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 PAIP1Q9H074 479 aaKnown RBP12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 NEUROD4Q9HD90 331 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 SLAMF8Q9P0V8 285 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 IFT80Q9P2H3 777 aaPredicted RBP12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 GPN3Q9UHW5 284 aaPredicted RBP12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 ST6GALNAC2Q9UJ37 374 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 AP3M1Q9Y2T2 418 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 SNX8Q9Y5X2 465 aa12.15□□□□□ -0.46
NDUFB11-202ENST00000377811 FXYD1O00168 92 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 CLDN4O14493 209 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ADAM10O14672 748 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 MED26O95402 600 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 C8orf89P0DMQ9 161 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 TCN1P20061 433 aaPredicted RBP12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 PPIBP23284 216 aaKnown RBP12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 MMP11P24347 488 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 CHI3L1P36222 383 aaPredicted RBP12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 CDKN2CP42773 168 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 MEOX1P50221 254 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 MTPNP58546 118 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ARG2P78540 354 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 MAT1AQ00266 395 aaKnown RBP12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 FOLH1Q04609 750 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 GTDC1Q4AE62 458 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 NANOGP8Q6NSW7 305 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 CLEC9AQ6UXN8 241 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 FBXW8Q8N3Y1 598 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ARHGEF39Q8N4T4 335 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 DTWD1Q8N5C7 304 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 OR51Q1Q8NH59 317 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 OR5P2Q8WZ92 322 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 TANKQ92844 425 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 NINJ1Q92982 152 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 UCN3Q969E3 161 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ANKRD27Q96NW4 1050 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ECSITQ9BQ95 431 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 NANOGQ9H9S0 305 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ZNF304Q9HCX3 659 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 PRDM9Q9NQV7 894 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ACSS1Q9NUB1 689 aaPredicted RBP12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 TAS2R9Q9NYW1 312 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 VAPAQ9P0L0 249 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 PACSIN3Q9UKS6 424 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 CORO2BQ9UQ03 480 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 PLEKHA6Q9Y2H5 1048 aa12.14□□□□□ -0.47
NDUFB11-202ENST00000377811 ME2P23368 584 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 SLC6A2P23975 617 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 PCSK6P29122 969 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 MPIP34949 423 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 XCR1P46094 333 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 OR1D4P47884 311 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 HNRNPFP52597 415 aaKnown RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 HBA1P69905 142 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 TFF3Q07654 80 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 STX4Q12846 297 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 SLC13A2Q13183 592 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 RABL3Q5HYI8 236 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 C1orf146Q5VVC0 180 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 Q6ZPB1 254 aaPredicted RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 SHISA6Q6ZSJ9 500 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 IFNEQ86WN2 208 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 LRRC25Q8N386 305 aaPredicted RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 RNF148Q8N7C7 305 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 PSMF1Q92530 271 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 TMEM125Q96AQ2 219 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 SDCCAG3Q96C92 435 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 FAM120BQ96EK7 910 aaKnown RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 LMF1Q96S06 567 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 KCTD14Q9BQ13 255 aaPredicted RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 ZNF559Q9BR84 538 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 GPATCH1Q9BRR8 931 aaKnown RBP12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 SLC35A5Q9BS91 424 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 RAD21L1Q9H4I0 556 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 PRTFDC1Q9NRG1 225 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 TAS2R7Q9NYW3 318 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 TMEM181Q9P2C4 612 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
NDUFB11-202ENST00000377811 TRAV17A0A0B4J275 112 aa12.12□□□□□ -0.47
NDUFB11-202ENST00000377811 RNF103-CHMP3A0A140T963 221 aa12.12□□□□□ -0.47
NDUFB11-202ENST00000377811 NKX2-6A6NCS4 301 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms