RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 HPCAL1P37235 193 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ST13P50502 369 aaKnown RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 VSX2P58304 361 aaPredicted RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 TBPL1P62380 186 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ACSM2AQ08AH3 577 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ITGADQ13349 1161 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 MAD2L1BPQ15013 274 aaPredicted RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 OXA1LQ15070 435 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 NPTX1Q15818 432 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 TRIM16LQ309B1 348 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 PRAMEF9Q5VWM5 478 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 MLIPQ5VWP3 458 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ACSM2BQ68CK6 577 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ZNF425Q6IV72 752 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 IGFN1Q86VF2 1251 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 P2RY8Q86VZ1 359 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 THOC6Q86W42 341 aaKnown RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 PAQR7Q86WK9 346 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 PHF10Q8WUB8 498 aaKnown RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 SMPDL3AQ92484 453 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 REPS1Q96D71 796 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 HSH2DQ96JZ2 352 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 OR4K3Q96R72 315 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 DUSP26Q9BV47 211 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 CHRNA10Q9GZZ6 450 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ADPRHL2Q9NX46 363 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 SELENONQ9NZV5 590 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 KIF17Q9P2E2 1029 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 ZNF282Q9UDV7 671 aaPredicted RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 SERTAD3Q9UJW9 196 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 PLCL2Q9UPR0 1127 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 MRPS2Q9Y399 296 aaKnown RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 SAMHD1Q9Y3Z3 626 aaKnown RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 TENM4Q6N022 2769 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
VRK3-202ENST00000377011 CLDN24A6NM45 220 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 K7EM74 188 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 HAT1O14929 419 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 ATP6V1G1O75348 118 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 RPL3P39023 403 aaKnown RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 PRDX1Q06830 199 aaKnown RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 CDC20Q12834 499 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 NAE1Q13564 534 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 HKDC1Q2TB90 917 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 DEFB109BQ30KR1 87 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 ANKRD34AQ69YU3 496 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 ZNF621Q6ZSS3 439 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 CNIH3Q8TBE1 160 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 COQ8BQ96D53 544 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 EGLN2Q96KS0 407 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 ZNF285Q96NJ3 590 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 UBL7Q96S82 380 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 NEURL2Q9BR09 285 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 RAB11FIP5Q9BXF6 653 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 CCDC90BQ9GZT6 254 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 SPNS1Q9H2V7 528 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 TPT1P8Q9HAU6 139 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 PLCXD1Q9NUJ7 323 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 PDP1Q9P0J1 537 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 PCDHGB3Q9Y5G1 929 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 KLK4Q9Y5K2 254 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 U3KQV3 271 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 COL6A6A6NMZ7 2263 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 SCN3AQ9NY46 2000 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 TNRC6AQ8NDV7 1962 aaKnown RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 C1orf226A1L170 272 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 BOLA2-SMG1P6H3BVE0 249 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 H7BY64 318 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 J3QRK9 145 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 RNASET2O00584 256 aaKnown RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 MITFO75030 526 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 LRATO95237 230 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 CCNYL3P0C7X3 344 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 OPRL1P41146 370 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 VLDLRP98155 873 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 MEF2AQ02078 507 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 RBBP4Q09028 425 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 IQCCQ4KMZ1 466 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 XKR6Q5GH73 641 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 COLEC12Q5KU26 742 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 CPTPQ5TA50 214 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 UBE2UQ5VVX9 321 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 AGTRAPQ6RW13 159 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 COX15Q7KZN9 410 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 RNF44Q7L0R7 432 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 OR8K5Q8NH50 307 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 OR56A3Q8NH54 315 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 GOT1L1Q8NHS2 421 aaPredicted RBP11.6□□□□□ -0.55
VRK3-202ENST00000377011 SLC22A18Q96BI1 424 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 MED8Q96G25 268 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 HRASLS5Q96KN8 279 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 C7orf34Q96L11 122 aa11.6□□□□□ -0.55
VRK3-202ENST00000377011 PRAP1Q96NZ9 151 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms