RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 QSOX2Q6ZRP7 698 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 MRGPREQ86SM8 312 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 SYT14Q8NB59 555 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 KATNB1Q9BVA0 655 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 MRPS30Q9NP92 439 aaKnown RBP23.76■■□□□ 1.39
C9orf40-201ENST00000376854 ISYNA1Q9NPH2 558 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 SLC13A4Q9UKG4 626 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 EXOSC1Q9Y3B2 195 aaKnown RBP23.76■■□□□ 1.39
C9orf40-201ENST00000376854 A0A1W2PS29 197 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 CSF3P09919 207 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 CLEC12AQ5QGZ9 265 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 ZNF730Q6ZMV8 503 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 CAMKK1Q8N5S9 505 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 GDPD1Q8N9F7 314 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 TRMT61BQ9BVS5 477 aaKnown RBP23.76■■□□□ 1.39
C9orf40-201ENST00000376854 TEX101Q9BY14 249 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 WDR26Q9H7D7 661 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 PRDM7Q9NQW5 492 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 SNX7Q9UNH6 387 aa23.76■■□□□ 1.39
C9orf40-201ENST00000376854 GPR55Q9Y2T6 319 aaPredicted RBP23.76■■□□□ 1.39
C9orf40-201ENST00000376854 CPSF4LA6NMK7 179 aaKnown RBP23.75■■□□□ 1.39
C9orf40-201ENST00000376854 NTN1O95631 604 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 AIFM1O95831 613 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 DRD3P35462 400 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 TSPAN31Q12999 210 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 TRAM2Q15035 370 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 C18orf63Q68DL7 685 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 ABHD17CQ6PCB6 329 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 MOAP1Q96BY2 351 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 FAM46AQ96IP4 442 aaKnown RBP23.75■■□□□ 1.39
C9orf40-201ENST00000376854 ST6GAL2Q96JF0 529 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 OR7D2Q96RA2 312 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 EQTNQ9NQ60 294 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 A8MV72 311 aaPredicted RBP23.75■■□□□ 1.39
C9orf40-201ENST00000376854 FAM47E-STBD1D6RA91 191 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 GUCY1B2O75343 617 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 GABRA5P31644 462 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 DDOSTP39656 456 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 PRR5P85299 388 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 PRAMEF8Q5VWM4 474 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 PRAMEF7Q5VXH5 474 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 TYW3Q6IPR3 259 aaKnown RBP23.75■■□□□ 1.39
C9orf40-201ENST00000376854 VRK2Q86Y07 508 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 OR52P1PQ8NH57 321 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 AP3S1Q92572 193 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 KLK6Q92876 244 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 TP53INP1Q96A56 240 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 ZG16BQ96DA0 208 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 SEMA4GQ9NTN9 838 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 KCNK6Q9Y257 313 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 GSTK1Q9Y2Q3 226 aa23.75■■□□□ 1.39
C9orf40-201ENST00000376854 KDM4EB2RXH2 506 aaPredicted RBP23.74■■□□□ 1.39
C9orf40-201ENST00000376854 SYT5O00445 386 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ALPPP05187 535 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 LIMS3P0CW19 117 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 LIMS4P0CW20 117 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ATP5A1P25705 553 aaKnown RBP23.74■■□□□ 1.39
C9orf40-201ENST00000376854 PKLRP30613 574 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 FABP5Q01469 135 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 CHRNEQ04844 493 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 KRT33BQ14525 404 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ZFP69Q49AA0 526 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 PYDC2Q56P42 97 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 MRM1Q6IN84 353 aaKnown RBP23.74■■□□□ 1.39
C9orf40-201ENST00000376854 RASSF6Q6ZTQ3 369 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 RRM2BQ7LG56 351 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 OR2L8Q8NGY9 312 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ASB16Q96NS5 453 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ARHGDIGQ99819 225 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ARHGAP9Q9BRR9 750 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 SLC38A1Q9H2H9 487 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 ANKRA2Q9H9E1 313 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 SLC6A20Q9NP91 592 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 HEATR5BQ9P2D3 2071 aa23.74■■□□□ 1.39
C9orf40-201ENST00000376854 CD79BP40259 229 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 RPS5P46782 204 aaKnown RBP23.73■■□□□ 1.39
C9orf40-201ENST00000376854 ZFP41Q8N8Y5 198 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 PRRG3Q9BZD7 231 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 C11orf54Q9H0W9 315 aaPredicted RBP23.73■■□□□ 1.39
C9orf40-201ENST00000376854 CCDC182A6NF36 153 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 POLR1CO15160 346 aaPredicted RBP23.73■■□□□ 1.39
C9orf40-201ENST00000376854 EMC8O43402 210 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 CSNK2A2P19784 350 aaPredicted RBP23.73■■□□□ 1.39
C9orf40-201ENST00000376854 CERS1P27544 350 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 MC3RP41968 323 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 DMPKQ09013 629 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 SLC48A1Q6P1K1 146 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 GJD3Q8N144 294 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 ZNF784Q8NCA9 323 aaPredicted RBP23.73■■□□□ 1.39
C9orf40-201ENST00000376854 NR4A3Q92570 626 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 DIO2Q92813 273 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 SNX18Q96RF0 628 aa23.73■■□□□ 1.39
C9orf40-201ENST00000376854 MID1O15344 667 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 TGM3Q08188 693 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 ST3GAL3Q11203 375 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 MADCAM1Q13477 382 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 IRF4Q15306 451 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 TBRG1Q3YBR2 411 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 PRR23CQ6ZRP0 262 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 LHFPL3Q86UP9 236 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms