RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LATO43561 262 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 GUCY1B2O75343 617 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 UBXN7O94888 489 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 NFATC1O95644 943 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 LIMS3P0CW19 117 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 LIMS4P0CW20 117 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ACP5P13686 325 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 HIST1H1TP22492 207 aaPredicted RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 GABRA5P31644 462 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 BCL6P41182 706 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 CAV3P56539 151 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 DUSP2Q05923 314 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 KRT33BQ14525 404 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 TRAM2Q15035 370 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ZIC1Q15915 447 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 GAB4Q2WGN9 574 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 PIP5KL1Q5T9C9 394 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 MRGPREQ86SM8 312 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ZFP41Q8N8Y5 198 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ACOT4Q8N9L9 421 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 OR56A1Q8NGH5 318 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 MS4A6EQ96DS6 147 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 FAM46AQ96IP4 442 aaKnown RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 PRSS16Q9NQE7 514 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 PRDM7Q9NQW5 492 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 MBNL1Q9NR56 388 aaKnown RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 SEMA4GQ9NTN9 838 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 IMP3Q9NV31 184 aaKnown RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 COMMD3Q9UBI1 195 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 COL4A3Q01955 1670 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 SEC14L5O43304 696 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CSF2P04141 144 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 SSTR4P31391 388 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 IL12RB1P42701 662 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 RAB28P51157 221 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CHRNEQ04844 493 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 TGM3Q08188 693 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 ZNF628Q5EBL2 1059 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 RASSF6Q6ZTQ3 369 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CACUL1Q86Y37 369 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 OR7D2Q96RA2 312 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 MRPS30Q9NP92 439 aaKnown RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 EQTNQ9NQ60 294 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 GPR55Q9Y2T6 319 aaPredicted RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 CKAP5Q14008 2032 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 KDM4EB2RXH2 506 aaPredicted RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 C4orf51C9J302 202 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CASKO14936 926 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 NTN1O95631 604 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CH25HO95992 272 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 ALPPP05187 535 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CSNK2A2P19784 350 aaPredicted RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 FGF9P31371 208 aaPredicted RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 CD79BP40259 229 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 PRR5P85299 388 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 ST3GAL3Q11203 375 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 RDH10Q8IZV5 341 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 VWA5B2Q8N398 1253 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 MOAP1Q96BY2 351 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
MSH5-201ENST00000375703 PRRG3Q9BZD7 231 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 SLC38A1Q9H2H9 487 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 CLCA2Q9UQC9 943 aa13.66□□□□□ -0.22
MSH5-201ENST00000375703 A0A1W2PS29 197 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 B4DXG7 233 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 AGRPO00253 132 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 SYT5O00445 386 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 EMC8O43402 210 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 CCNYL3P0C7X3 344 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 TRAPPC2P0DI81 140 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 TRAPPC2BP0DI82 140 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 IFNA8P32881 189 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 MPIP34949 423 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 CDH11P55287 796 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 PRAMEF8Q5VWM4 474 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 PRAMEF7Q5VXH5 474 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 MRM1Q6IN84 353 aaKnown RBP13.65□□□□□ -0.22
MSH5-201ENST00000375703 ABHD17CQ6PCB6 329 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 ATP6V1C2Q8NEY4 427 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 NUP43Q8NFH3 380 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 NR4A3Q92570 626 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 KLK6Q92876 244 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 KIAA1143Q96AT1 154 aaPredicted RBP13.65□□□□□ -0.22
MSH5-201ENST00000375703 FRMD6Q96NE9 622 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 NUFIP1Q9UHK0 495 aaKnown RBP13.65□□□□□ -0.22
MSH5-201ENST00000375703 A6NL46 340 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 PLA2G10O15496 165 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 AIFM1O95831 613 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
MSH5-201ENST00000375703 MYL9P24844 172 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 SLC1A3P43003 542 aa13.65□□□□□ -0.22
MSH5-201ENST00000375703 OMPP47874 163 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms