RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CDS1Q92903 461 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 TMEM168Q9H0V1 697 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ADAP2Q9NPF8 381 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 PEX16Q9Y5Y5 336 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ZNF780BQ9Y6R6 833 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 KIF26AQ9ULI4 1882 aaPredicted RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 LDB3O75112 727 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SCG5P05408 212 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ALOX5P09917 674 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 DRD2P14416 443 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 MPIP34949 423 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 FRKP42685 505 aaPredicted RBP16.01■□□□□ 0.15
RXRB-201ENST00000374680 CRYBB2P43320 205 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 C12orf73Q69YU5 71 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 PHC2Q8IXK0 858 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 GALNT12Q8IXK2 581 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 ELP4Q96EB1 424 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 RNFT2Q96EX2 444 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 SLC30A2Q9BRI3 323 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 TBC1D17Q9HA65 648 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 KLHL3Q9UH77 587 aa16.01■□□□□ 0.15
RXRB-201ENST00000374680 COL4A3Q01955 1670 aa16■□□□□ 0.15
RXRB-201ENST00000374680 ZIC2O95409 532 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 C5AR1P21730 350 aa16■□□□□ 0.15
RXRB-201ENST00000374680 RGS8P57771 180 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 RPS21P63220 83 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 HNRNPA0Q13151 305 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 CRTC2Q53ET0 693 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 PRSS41Q7RTY9 318 aa16■□□□□ 0.15
RXRB-201ENST00000374680 NRMQ8IXM6 262 aa16■□□□□ 0.15
RXRB-201ENST00000374680 ZNF614Q8N883 585 aa16■□□□□ 0.15
RXRB-201ENST00000374680 BBS1Q8NFJ9 593 aa16■□□□□ 0.15
RXRB-201ENST00000374680 OR2L8Q8NGY9 312 aa16■□□□□ 0.15
RXRB-201ENST00000374680 HERVK_113Q902F9 699 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SLC35A4Q96G79 324 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SLC38A1Q9H2H9 487 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SMURF1Q9HCE7 757 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SSR3Q9UNL2 185 aa16■□□□□ 0.15
RXRB-201ENST00000374680 CFL2Q9Y281 166 aa16■□□□□ 0.15
RXRB-201ENST00000374680 YBX2Q9Y2T7 364 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 CACNB4O00305 520 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 ALPPP05187 535 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SDC2P34741 201 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SNRPGP62308 76 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 RPS25P62851 125 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 C1DQ13901 141 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 TIMM50Q3ZCQ8 353 aa16■□□□□ 0.15
RXRB-201ENST00000374680 HSDL2Q6YN16 418 aa16■□□□□ 0.15
RXRB-201ENST00000374680 AMIGO1Q86WK6 493 aa16■□□□□ 0.15
RXRB-201ENST00000374680 MORN4Q8NDC4 146 aa16■□□□□ 0.15
RXRB-201ENST00000374680 OR7G2Q8NG99 324 aa16■□□□□ 0.15
RXRB-201ENST00000374680 TEX47Q8TBZ9 253 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SMAP2Q8WU79 429 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 TMEM255BQ8WV15 326 aa16■□□□□ 0.15
RXRB-201ENST00000374680 OR1E3Q8WZA6 343 aa16■□□□□ 0.15
RXRB-201ENST00000374680 TM9SF4Q92544 642 aa16■□□□□ 0.15
RXRB-201ENST00000374680 TRNT1Q96Q11 434 aaKnown RBP16■□□□□ 0.15
RXRB-201ENST00000374680 SDHCQ99643 169 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 HDHD5Q9BXW7 423 aa16■□□□□ 0.15
RXRB-201ENST00000374680 ZBTB32Q9Y2Y4 487 aaPredicted RBP16■□□□□ 0.15
RXRB-201ENST00000374680 PCDHGA4Q9Y5G9 962 aa16■□□□□ 0.15
RXRB-201ENST00000374680 SEC16AO15027 2179 aa16■□□□□ 0.15
RXRB-201ENST00000374680 A0A1W2PRQ8 180 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 F3P13726 295 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 COL9A1P20849 921 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 SMIM11AP58511 58 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 BAK1Q16611 211 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 TMEM196Q5HYL7 178 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 ATAD3BQ5T9A4 648 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 FCRLBQ6BAA4 426 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 SLC48A1Q6P1K1 146 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 NRARPQ7Z6K4 114 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 NANOGP1Q8N7R0 232 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 C7orf57Q8NEG2 295 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 RASSF5Q8WWW0 418 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 MND1Q9BWT6 205 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 MED20Q9H944 212 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 SFXN1Q9H9B4 322 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 GIMAP4Q9NUV9 329 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 FBXO34Q9NWN3 711 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 LSM2Q9Y333 95 aaKnown RBP15.99■□□□□ 0.15
RXRB-201ENST00000374680 TSC22D4Q9Y3Q8 395 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 CHST2Q9Y4C5 530 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 DOCK8Q8NF50 2099 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 EPOPA6NHQ4 379 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 A8MVJ9 347 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 NCR1O76036 304 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 MYL12AP19105 171 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 CMPK1P30085 196 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 RCVRNP35243 200 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 STXBP1P61764 594 aaKnown RBP15.99■□□□□ 0.15
RXRB-201ENST00000374680 PRR5P85299 388 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 NCF4Q15080 339 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 ZNF791Q3KP31 576 aaPredicted RBP15.99■□□□□ 0.15
RXRB-201ENST00000374680 TRMT12Q53H54 448 aaKnown RBP15.99■□□□□ 0.15
RXRB-201ENST00000374680 KIAA1324Q6UXG2 1013 aaKnown RBP15.99■□□□□ 0.15
RXRB-201ENST00000374680 PLEKHM3Q6ZWE6 761 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 RTL10Q7L3V2 364 aa15.99■□□□□ 0.15
RXRB-201ENST00000374680 TP53INP1Q96A56 240 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms