RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 PRICKLE2Q7Z3G6 844 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 SYT14Q8NB59 555 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 OR8D4Q8NGM9 314 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 ST6GAL2Q96JF0 529 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 CAMK1GQ96NX5 476 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 ENTPD4Q9Y227 616 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 SF3B6Q9Y3B4 125 aaKnown RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 A0A1W2PR48 441 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 TBC1D3BA6NDS4 549 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 ANTXRLA6NF34 631 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 CCDC182A6NF36 153 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 CPSF4LA6NMK7 179 aaKnown RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 A8MV72 311 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 C4orf51C9J302 202 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 FRS3O43559 492 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 UBXN7O94888 489 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 FHP07954 510 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 MYOGP15173 224 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 HIST1H1TP22492 207 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 DDOSTP39656 456 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 MRPS15P82914 257 aaKnown RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 DUSP2Q05923 314 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 PYDC2Q56P42 97 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 ZNF730Q6ZMV8 503 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 OR56A1Q8NGH5 318 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 ZNF707Q96C28 371 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 TRMT61BQ9BVS5 477 aaKnown RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 PRRG3Q9BZD7 231 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 ISYNA1Q9NPH2 558 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 PRSS16Q9NQE7 514 aa17.98■□□□□ 0.47
TMEM53-202ENST00000372237 EXOSC1Q9Y3B2 195 aaKnown RBP17.98■□□□□ 0.47
TMEM53-202ENST00000372237 CENPXA8MT69 81 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 RPS5P46782 204 aaKnown RBP17.97■□□□□ 0.47
TMEM53-202ENST00000372237 PRR5P85299 388 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 TSPAN31Q12999 210 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 TBRG1Q3YBR2 411 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 PRR23CQ6ZRP0 262 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 QSOX2Q6ZRP7 698 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 C7orf61Q8IZ16 206 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 ACOT4Q8N9L9 421 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 OR52P1PQ8NH57 321 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 TP53INP1Q96A56 240 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 MS4A6EQ96DS6 147 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 FAM46AQ96IP4 442 aaKnown RBP17.97■□□□□ 0.47
TMEM53-202ENST00000372237 SNX18Q96RF0 628 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 ANKRA2Q9H9E1 313 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 MRPS30Q9NP92 439 aaKnown RBP17.97■□□□□ 0.47
TMEM53-202ENST00000372237 EQTNQ9NQ60 294 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 ASB4Q9Y574 426 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 FAM172BPA6NC97 362 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 C5orf67F2Z3F1 127 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 GUCY1B2O75343 617 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 HOXB3P14651 431 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-202ENST00000372237 GABRA5P31644 462 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 FABP5Q01469 135 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 MADCAM1Q13477 382 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 TRAM2Q15035 370 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 MRGPREQ86SM8 312 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 VRK2Q86Y07 508 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 ZFP41Q8N8Y5 198 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 MOAP1Q96BY2 351 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 DMRTB1Q96MA1 342 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 OR7D2Q96RA2 312 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 ARHGAP9Q9BRR9 750 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 C11orf54Q9H0W9 315 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-202ENST00000372237 WDR26Q9H7D7 661 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 MBNL1Q9NR56 388 aaKnown RBP17.97■□□□□ 0.47
TMEM53-202ENST00000372237 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
TMEM53-202ENST00000372237 DOCK9Q9BZ29 2069 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 A0A1W2PS29 197 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 POLR1CO15160 346 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-202ENST00000372237 AIFM1O95831 613 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 ALPPP05187 535 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 LIMS3P0CW19 117 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 LIMS4P0CW20 117 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 ST3GAL3Q11203 375 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 KRT33BQ14525 404 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 ZIC1Q15915 447 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 PRAMEF8Q5VWM4 474 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 PRAMEF7Q5VXH5 474 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 C18orf63Q68DL7 685 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 RASSF6Q6ZTQ3 369 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 LHFPL3Q86UP9 236 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 GJD3Q8N144 294 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 KLK6Q92876 244 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 ZG16BQ96DA0 208 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 PRDM7Q9NQW5 492 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 SEMA4GQ9NTN9 838 aa17.96■□□□□ 0.47
TMEM53-202ENST00000372237 HMX3A6NHT5 357 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 SYT5O00445 386 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 CASKO14936 926 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 CH25HO95992 272 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 CSNK2A2P19784 350 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-202ENST00000372237 SSTR4P31391 388 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 IFNA8P32881 189 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 CDH11P55287 796 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 CAV3P56539 151 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 CHRNEQ04844 493 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 SLC35F1Q5T1Q4 408 aa17.95■□□□□ 0.46
TMEM53-202ENST00000372237 ABHD17CQ6PCB6 329 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms