RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PROKR2Q8NFJ6 384 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 OR7G2Q8NG99 324 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 MRGPRX1Q96LB2 322 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 OR2A14Q96R47 310 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 ABCB10Q9NRK6 738 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 PEX16Q9Y5Y5 336 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 DUXAA6NLW8 204 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 CCNYL3P0C7X3 344 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 PORP16435 677 aaPredicted RBP27.12■■□□□ 1.93
SSBP3-204ENST00000371320 ACSL1P33121 698 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 FAM214AQ32MH5 1076 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 FAM111BQ6SJ93 734 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 TM4SF19Q96DZ7 209 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 RIPOR3Q96MK2 946 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 ZNF582Q96NG8 517 aaPredicted RBP27.12■■□□□ 1.93
SSBP3-204ENST00000371320 OR2A5Q96R48 311 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 EGLN3Q9H6Z9 239 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 TRIM45Q9H8W5 580 aaPredicted RBP27.12■■□□□ 1.93
SSBP3-204ENST00000371320 KLHL28Q9NXS3 571 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 KCMF1Q9P0J7 381 aa27.12■■□□□ 1.93
SSBP3-204ENST00000371320 FAM170BA6NMN3 283 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 HNRNPA2B1P22626 353 aaKnown RBP27.11■■□□□ 1.93
SSBP3-204ENST00000371320 IFNA8P32881 189 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 AVPR1BP47901 424 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 PDX1P52945 283 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 ZNF45Q02386 682 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 PRKCDQ05655 676 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 DEFB134Q4QY38 66 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 ZNF730Q6ZMV8 503 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 PRICKLE2Q7Z3G6 844 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 SLC22A16Q86VW1 577 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 SAMD14Q8IZD0 417 aaPredicted RBP27.11■■□□□ 1.93
SSBP3-204ENST00000371320 OR4K14Q8NGD5 310 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 OR52P1PQ8NH57 321 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 TEX47Q8TBZ9 253 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 MS4A4EQ96PG1 132 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 SERINC2Q96SA4 455 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 PLA2G12AQ9BZM1 189 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 EXOSC4Q9NPD3 245 aaKnown RBP27.11■■□□□ 1.93
SSBP3-204ENST00000371320 SEMA4GQ9NTN9 838 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 CHST2Q9Y4C5 530 aa27.11■■□□□ 1.93
SSBP3-204ENST00000371320 FCMRO60667 390 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 CTSVO60911 334 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 UGT2B7P16662 529 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 PRKAR1BP31321 381 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 EFNB1P98172 346 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 ST3GAL3Q11203 375 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 C1DQ13901 141 aaKnown RBP27.1■■□□□ 1.93
SSBP3-204ENST00000371320 MFSD12Q6NUT3 480 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 SLC16A11Q8NCK7 471 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 DIO2Q92813 273 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 CNPPD1Q9BV87 410 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 POLR2J2Q9GZM3 115 aaKnown RBP27.1■■□□□ 1.93
SSBP3-204ENST00000371320 POLE4Q9NR33 117 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 ANKMY1Q9P2S6 941 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 ISPDA4D126 451 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 GSAPA4D1B5 854 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 MYL12BO14950 172 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 P2RX6O15547 441 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 ZIC2O95409 532 aaPredicted RBP27.1■■□□□ 1.93
SSBP3-204ENST00000371320 DLX2Q07687 328 aaPredicted RBP27.1■■□□□ 1.93
SSBP3-204ENST00000371320 ZNF181Q2M3W8 571 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 HEPHL1Q6MZM0 1159 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 RRM2BQ7LG56 351 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 OR52I1Q8NGK6 324 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 OR10G6Q8NH81 332 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 POLMQ9NP87 494 aaPredicted RBP27.1■■□□□ 1.93
SSBP3-204ENST00000371320 IRAK4Q9NWZ3 460 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 NTMQ9P121 344 aa27.1■■□□□ 1.93
SSBP3-204ENST00000371320 DIMT1Q9UNQ2 313 aaKnown RBP27.1■■□□□ 1.93
SSBP3-204ENST00000371320 MYO9BQ13459 2157 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 A6NCN8 305 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 TNFSF14O43557 240 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 RAB36O95755 333 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 POLR2CP19387 275 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 ENDOUP21128 410 aaKnown RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 ADAM15Q13444 863 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 COL9A2Q14055 689 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 CDC73Q6P1J9 531 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SLC27A4Q6P1M0 643 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 PAQR6Q6TCH4 344 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 LYSMD2Q8IV50 215 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 OR4N5Q8IXE1 308 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 URADA6NGE7 173 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 TNFRSF10CO14798 259 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 TBX1O43435 398 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 B3GALT2O43825 422 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 HBQ1P09105 142 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SMIM10L1P0DMW3 83 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 PSMA1P25786 263 aaKnown RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 TLX1P31314 330 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 TRHRP34981 398 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 MAGEA10P43363 369 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SRP54P61011 504 aaKnown RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SIM1P81133 766 aaPredicted RBP27.09■■□□□ 1.93
SSBP3-204ENST00000371320 TSPAN31Q12999 210 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 RUNX2Q13950 521 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 FIGLAQ6QHK4 219 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 PARP16Q8N5Y8 322 aa27.09■■□□□ 1.93
SSBP3-204ENST00000371320 SLC9A6Q92581 669 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms