RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SNRNP200O75643 2136 aaKnown RBP6.59□□□□□ -1.35
USP1-202ENST00000371146 BAHCC1Q9P281 2608 aa6.59□□□□□ -1.35
USP1-202ENST00000371146 AGFG2O95081 481 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 TSPAN12O95859 305 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 PROCP04070 461 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 HBQ1P09105 142 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 LIPCP11150 499 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 GABRA3P34903 492 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 MAGEA3P43357 314 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 RPL5P46777 297 aaKnown RBP6.59□□□□□ -1.36
USP1-202ENST00000371146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.59□□□□□ -1.36
USP1-202ENST00000371146 VPS26BQ4G0F5 336 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 KCTD21Q4G0X4 260 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 RPS19BP1Q86WX3 136 aaKnown RBP6.59□□□□□ -1.36
USP1-202ENST00000371146 SLITRK4Q8IW52 837 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 GHDCQ8N2G8 530 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 GALNT16Q8N428 558 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 TADA1Q96BN2 335 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 ZNF501Q96CX3 271 aaPredicted RBP6.59□□□□□ -1.36
USP1-202ENST00000371146 C19orf60Q96EN9 201 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 HEY2Q9UBP5 337 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 ENOPH1Q9UHY7 261 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 DTX4Q9Y2E6 619 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 CCDC88CQ9P219 2028 aa6.59□□□□□ -1.36
USP1-202ENST00000371146 ZFC3H1O60293 1989 aaKnown RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 TFECO14948 347 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 VPS4BO75351 444 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 BMP10O95393 424 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 WT1P19544 449 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 CSNK2A2P19784 350 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 HIST1H1TP22492 207 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 CCKBRP32239 447 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 CRHR1P34998 444 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 SOX6P35712 828 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 PIGAP37287 484 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 WDR4P57081 412 aaKnown RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 SNRPNP63162 240 aaKnown RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 ACVR1Q04771 509 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 RUNX2Q13950 521 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 SLC14A2Q15849 920 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 EXOC3L2Q2M3D2 409 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 DESI1Q6ICB0 168 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TCTN3Q6NUS6 607 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ZYG11AQ6WRX3 759 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 BNC2Q6ZN30 1099 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 LRRC70Q7Z2Q7 622 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 GALNT12Q8IXK2 581 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 CCDC36Q8IYA8 594 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 COX18Q8N8Q8 333 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 FAM181AQ8N9Y4 354 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 FDCSPQ8NFU4 85 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 OR4A15Q8NGL6 344 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ZNF563Q8TA94 476 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TPD52L3Q96J77 140 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 C5orf34Q96MH7 638 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TBL1XR1Q9BZK7 514 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 LRMDAQ9H2I8 198 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 PCTPQ9UKL6 214 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TMEM184BQ9Y519 407 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 IGLV3-16A0A075B6K0 115 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 PCP4L1A6NKN8 68 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 PROB1E7EW31 1015 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ATP6V1G2-DDX39BF2Z307 99 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 GFYI3L273 518 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 hCG_2039718K7EN88 272 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ACOX3O15254 700 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 MTHFD2P13995 350 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 LBPP18428 481 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 SFTPDP35247 375 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TMPRSS3P57727 454 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 NAB1Q13506 487 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TBRG1Q3YBR2 411 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 KRBOX4Q5JUW0 171 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 RNF111Q6ZNA4 994 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 CYP4Z2PQ8N1L4 340 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ZADH2Q8N4Q0 377 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 OR2L5Q8NG80 312 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 VANGL1Q8TAA9 524 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 PHOSPHO1Q8TCT1 267 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TRIM63Q969Q1 353 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 FER1L6-AS2Q96M78 137 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 CD180Q99467 661 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ECSITQ9BQ95 431 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 GON7Q9BXV9 100 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 HES7Q9BYE0 225 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 VN1R1Q9GZP7 353 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 MKKSQ9NPJ1 570 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 C1orf109Q9NX04 203 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 LRFN1Q9P244 771 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 PILRAQ9UKJ1 303 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 MKLN1Q9UL63 735 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 TP53TG5Q9Y2B4 290 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 A0A1W2PRB8 838 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ZNF891A8MT65 544 aaPredicted RBP6.58□□□□□ -1.36
USP1-202ENST00000371146 EFSO43281 561 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 OR2J2O76002 312 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 ZNF682O95780 498 aa6.58□□□□□ -1.36
USP1-202ENST00000371146 C6orf47O95873 294 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms