RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TSSK3Q96PN8 268 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 PRRX2Q99811 253 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 VKORC1Q9BQB6 163 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TINAGL1Q9GZM7 467 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 SPRTNQ9H040 489 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 LRRN3Q9H3W5 708 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 CCDC167Q9P0B6 97 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 CAMK2AQ9UQM7 478 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TMED5Q9Y3A6 229 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 RRP15Q9Y3B9 282 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 PCDHGB5Q9Y5G0 923 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 SPEGQ15772 3267 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 A0A0G2JNJ9 132 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 IGHV5-10-1A0A0J9YXX1 117 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ARHGAP10A1A4S6 786 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 WASHC1A8K0Z3 465 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 H3BMH7 237 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NTN3O00634 580 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 ERI3O43414 337 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 PCDH7O60245 1069 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 LRATO95237 230 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 EIF2S1P05198 315 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 RAP2AP10114 183 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 THRAP10827 490 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRPS2P11908 318 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 FOLR1P15328 257 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CKMT2P17540 419 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 IL11P20809 199 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 JAK1P23458 1154 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ATP5A1P25705 553 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 GSTM2P28161 218 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRDX6P30041 224 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CPOXP36551 454 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MAGEA8P43361 318 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 DUSP3P51452 185 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 POLR2JP52435 117 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 BTN3A2P78410 334 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PHEXP78562 749 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MC1RQ01726 317 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MAD2L1Q13257 205 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 RUNX2Q13950 521 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CYLC2Q14093 348 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 BAK1Q16611 211 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRTGQ2VWP7 1150 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ZIK1Q3SY52 487 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 PLA1AQ53H76 456 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SPIN4Q56A73 249 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 WASHC2DQ5SRD0 308 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 FAM71E1Q6IPT2 247 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TMEM71Q6P5X7 295 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ASRGL1Q7L266 308 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRSS41Q7RTY9 318 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PRSS42Q7Z5A4 293 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ARHGAP22Q7Z5H3 698 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PDSS2Q86YH6 399 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ARMC8Q8IUR7 673 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 D2HGDHQ8N465 521 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TBC1D19Q8N5T2 526 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 OR2L5Q8NG80 312 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 OR7A2PQ8NGA2 310 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 OR8K5Q8NH50 307 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RP9Q8TA86 221 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 NAT6Q93015 286 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 GFM2Q969S9 779 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 VPS33AQ96AX1 596 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RCN3Q96D15 328 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SLC41A2Q96JW4 573 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CD180Q99467 661 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NPAS2Q99743 824 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 C17orf62Q9BQA9 187 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NDC1Q9BTX1 674 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 EDEM2Q9BV94 578 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 REXO4Q9GZR2 422 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 CHRNA10Q9GZZ6 450 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 CLMPQ9H6B4 373 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 DDX31Q9H8H2 851 aaKnown RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 NMRK1Q9NWW6 199 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 TAS2R1Q9NYW7 299 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 AHSPQ9NZD4 102 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 Q9UFV3 132 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 RPS6KA6Q9UK32 745 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PLCL2Q9UPR0 1127 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ERVK-11Q9UQG0 969 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ASB4Q9Y574 426 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 PCNX2A6NKB5 2137 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 A0A0A6YYD5 115 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 LOC102723971A0A1B0GUV8 181 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 GNG14A0A1W2PPG7 69 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 GABRR3A8MPY1 467 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 NR5A2O00482 541 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 AIM2O14862 343 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 FLRT2O43155 660 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 KLK10O43240 276 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 FOXS1O43638 330 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 SRPX2O60687 465 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 SCN2BO60939 215 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 MYO1DO94832 1006 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 ZBTB11O95625 1053 aaPredicted RBP3.33□□□□□ -1.88
MCF2-202ENST00000370573 CPNE6O95741 557 aa3.33□□□□□ -1.88
MCF2-202ENST00000370573 LAMP1P11279 417 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms