RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GRHL3Q8TE85 626 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 IPCEF1Q8WWN9 437 aaPredicted RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 HAS2Q92819 552 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 TMBIM1Q969X1 311 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 TM4SF19Q96DZ7 209 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 YIPF6Q96EC8 236 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 REXO5Q96IC2 774 aaKnown RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 SLC39A3Q9BRY0 314 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 IL1RL2Q9HB29 575 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 ZNF160Q9HCG1 818 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 MID1IP1Q9NPA3 183 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 TMEM184CQ9NVA4 438 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 TSR3Q9UJK0 312 aaKnown RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 DNAJC15Q9Y5T4 150 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 NSG1A0A0A6YYJ2 146 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 CLDN24A6NM45 220 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 H0YIG0 161 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 SLC1A7O00341 560 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 STX16O14662 325 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 HAT1O14929 419 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 UPK1BO75841 260 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 SNX4O95219 450 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 CLIC3O95833 236 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 F7P08709 466 aaPredicted RBP13.93□□□□□ -0.18
LMO4-201ENST00000370542 UROSP10746 265 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 GGT1P19440 569 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 PCMT1P22061 227 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 POLR2JP52435 117 aaKnown RBP13.93□□□□□ -0.18
LMO4-201ENST00000370542 ERVK-8P63133 956 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 ZNF45Q02386 682 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 LCP2Q13094 533 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 SELENBP1Q13228 472 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 AQP6Q13520 282 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 PCOLCEQ15113 449 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 SMU1Q2TAY7 513 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 ZNF691Q5VV52 312 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 DYNC2LI1Q8TCX1 351 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 ATL1Q8WXF7 558 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 RERGQ96A58 199 aaPredicted RBP13.93□□□□□ -0.18
LMO4-201ENST00000370542 MMABQ96EY8 250 aaPredicted RBP13.93□□□□□ -0.18
LMO4-201ENST00000370542 ZNF486Q96H40 463 aaPredicted RBP13.93□□□□□ -0.18
LMO4-201ENST00000370542 IMMP1LQ96LU5 166 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 HOXD1Q9GZZ0 328 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 RNF32Q9H0A6 362 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 ZNF700Q9H0M5 742 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 TOR3AQ9H497 397 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 NTN4Q9HB63 628 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 TRPC4Q9UBN4 977 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 PCNX1Q96RV3 2341 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 CPAMD8Q8IZJ3 1885 aa13.93□□□□□ -0.18
LMO4-201ENST00000370542 PNMA8CA0A1B0GUJ8 204 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 H7BY64 318 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 UPK1AO00322 258 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 UBFD1O14562 309 aaKnown RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 SNPHO15079 494 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PRKD3O94806 890 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 KCNH1O95259 989 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 NSA2O95478 260 aaKnown RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 APOA1P02647 267 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 YAP1P46937 504 aaKnown RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 TNFSF10P50591 281 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 TPTEP56180 551 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PPP2R2BQ00005 443 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 KEAP1Q14145 624 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 CAPRIN1Q14444 709 aaKnown RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 ZNF460Q14592 562 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 ZNF362Q5T0B9 420 aaPredicted RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 CLEC6AQ6EIG7 209 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 UBE2R2Q712K3 238 aaPredicted RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 ISCA2Q86U28 154 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 SLC22A16Q86VW1 577 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PLD3Q8IV08 490 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 CPNE9Q8IYJ1 553 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PRSS58Q8IYP2 241 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 TRIM63Q969Q1 353 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PHF21BQ96EK2 531 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 C5orf34Q96MH7 638 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PRAP1Q96NZ9 151 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 SNX18Q96RF0 628 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 SARGQ9BW04 601 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 PCBD2Q9H0N5 130 aa13.92□□□□□ -0.18
LMO4-201ENST00000370542 KAT8Q9H7Z6 458 aaKnown RBP13.92□□□□□ -0.18
LMO4-201ENST00000370542 SCN2AQ99250 2005 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 A0A0A6YYC8 382 aaPredicted RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 LOC100130705A0A1B0GUX0 176 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 I3L1I5 382 aaPredicted RBP13.91□□□□□ -0.18
LMO4-201ENST00000370542 GSTA4O15217 222 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 SLC16A5O15375 505 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 KRT6AP02538 564 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 KRT6BP04259 564 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 KRT8P05787 483 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 C8GP07360 202 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 HEXBP07686 556 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 ANXA5P08758 320 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 BMP4P12644 408 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 ICAM2P13598 275 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 CD1DP15813 335 aa13.91□□□□□ -0.18
LMO4-201ENST00000370542 CXCR2P25025 360 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms